RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 PSMG3-AS1Q96PY0 264 aa17.35■□□□□ 0.37
SND1-214ENST00000489417 CABLES2Q9BTV7 478 aa17.35■□□□□ 0.37
SND1-214ENST00000489417 TAF9BQ9HBM6 251 aa17.35■□□□□ 0.37
SND1-214ENST00000489417 CTSZQ9UBR2 303 aa17.35■□□□□ 0.37
SND1-214ENST00000489417 FLVCR2Q9UPI3 526 aa17.35■□□□□ 0.37
SND1-214ENST00000489417 IGKV1-6A0A0C4DH72 117 aa17.34■□□□□ 0.37
SND1-214ENST00000489417 ARPC1BO15143 372 aaKnown RBP17.34■□□□□ 0.37
SND1-214ENST00000489417 NDUFB7P17568 137 aa17.34■□□□□ 0.37
SND1-214ENST00000489417 HERPUD1Q15011 391 aa17.34■□□□□ 0.37
SND1-214ENST00000489417 TMEM155Q4W5P6 130 aa17.34■□□□□ 0.37
SND1-214ENST00000489417 LRRC10Q5BKY1 277 aa17.34■□□□□ 0.37
SND1-214ENST00000489417 ZNF660Q6AZW8 331 aaPredicted RBP17.34■□□□□ 0.37
SND1-214ENST00000489417 TRAT1Q6PIZ9 186 aa17.34■□□□□ 0.37
SND1-214ENST00000489417 LHFPL1Q86WI0 220 aa17.34■□□□□ 0.37
SND1-214ENST00000489417 FGFRL1Q8N441 504 aa17.34■□□□□ 0.37
SND1-214ENST00000489417 OR6F1Q8NGZ6 308 aa17.34■□□□□ 0.37
SND1-214ENST00000489417 LURAP1Q96LR2 239 aa17.34■□□□□ 0.37
SND1-214ENST00000489417 ZNF2Q9BSG1 426 aaPredicted RBP17.34■□□□□ 0.37
SND1-214ENST00000489417 DCTN5Q9BTE1 182 aa17.34■□□□□ 0.37
SND1-214ENST00000489417 COL12A1Q99715 3063 aa17.34■□□□□ 0.37
SND1-214ENST00000489417 LRBAP50851 2863 aa17.34■□□□□ 0.37
SND1-214ENST00000489417 CEACAM18A8MTB9 384 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 C12orf77C9JDV5 145 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 BET1O15155 118 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 IGHV4-39P01824 125 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 SSTR2P30874 369 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 RAG2P55895 527 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 RAB25P57735 213 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 DHRS11Q6UWP2 260 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 ZNF554Q86TJ5 538 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 MRGPRFQ96AM1 343 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 KIRREL1Q96J84 757 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 LIME1Q9H400 295 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 OR6C3Q9NZP0 311 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 PCDHB10Q9UN67 800 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 LRRK2Q5S007 2527 aa17.33■□□□□ 0.36
SND1-214ENST00000489417 DVL1O14640 695 aa17.32■□□□□ 0.36
SND1-214ENST00000489417 FCN3O75636 299 aa17.32■□□□□ 0.36
SND1-214ENST00000489417 FCGR2CP31995 323 aa17.32■□□□□ 0.36
SND1-214ENST00000489417 GPR6P46095 362 aaPredicted RBP17.32■□□□□ 0.36
SND1-214ENST00000489417 CR1LQ2VPA4 569 aa17.32■□□□□ 0.36
SND1-214ENST00000489417 PRR18Q8N4B5 295 aa17.32■□□□□ 0.36
SND1-214ENST00000489417 UBALD1Q8TB05 177 aa17.32■□□□□ 0.36
SND1-214ENST00000489417 GIMAP1Q8WWP7 306 aa17.32■□□□□ 0.36
SND1-214ENST00000489417 TRBV6-7A0A0A0MS04 114 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 OR5H14A6NHG9 310 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 DIRAS3O95661 229 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 DHFRP00374 187 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 RPS2P15880 293 aaKnown RBP17.31■□□□□ 0.36
SND1-214ENST00000489417 NPY4RP50391 375 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 AADACL3Q5VUY0 350 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 SPICQ8N5J4 248 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 ZDHHC22Q8N966 263 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 ZNF565Q8N9K5 539 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 OR1L1Q8NH94 360 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 IL1F10Q8WWZ1 152 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 TMPRSS13Q9BYE2 586 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 MIOXQ9UGB7 285 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 VSIG4Q9Y279 399 aa17.31■□□□□ 0.36
SND1-214ENST00000489417 SPTAN1Q13813 2472 aaKnown RBP17.31■□□□□ 0.36
SND1-214ENST00000489417 TRGV10A0A0A0MS01 117 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 MEX3AA1L020 520 aaKnown RBP17.3■□□□□ 0.36
SND1-214ENST00000489417 NPIPB11E5RHQ5 1161 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 PEX14O75381 377 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 HBZP02008 142 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 RLN1P04808 185 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 GZMHP20718 246 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 NFYAP23511 347 aaPredicted RBP17.3■□□□□ 0.36
SND1-214ENST00000489417 ZNF787Q6DD87 383 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 ZNF525Q8N782 197 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 OR10J5Q8NHC4 309 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 MARCH1Q8TCQ1 289 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 ARL11Q969Q4 196 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 BARX1Q9HBU1 254 aaPredicted RBP17.3■□□□□ 0.36
SND1-214ENST00000489417 OPN4Q9UHM6 478 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 TENM4Q6N022 2769 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 A0A0B4J293 547 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 C15orf65H3BRN8 121 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 SPINT2O43291 252 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 AADACP22760 399 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 FPR2P25090 351 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 IL2RGP31785 369 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 SSTR5P35346 364 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 ECI1P42126 302 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 MECP2P51608 486 aaKnown RBP17.3■□□□□ 0.36
SND1-214ENST00000489417 HERV-K104P61576 105 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 MEF2CQ06413 473 aaPredicted RBP17.3■□□□□ 0.36
SND1-214ENST00000489417 TATDN3Q17R31 274 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 OR8B3Q8NGG8 313 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 NRGNQ92686 78 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 MARVELD3Q96A59 401 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 GALMQ96C23 342 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 NEIL1Q96FI4 390 aaPredicted RBP17.3■□□□□ 0.36
SND1-214ENST00000489417 SCGB3A2Q96PL1 93 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 OR8B2Q96RD0 313 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 FXYD6Q9H0Q3 95 aa17.3■□□□□ 0.36
SND1-214ENST00000489417 UTP20O75691 2785 aaKnown RBP17.29■□□□□ 0.36
SND1-214ENST00000489417 hADV38S2A0JD32 116 aa17.29■□□□□ 0.36
SND1-214ENST00000489417 TUSC2O75896 110 aa17.29■□□□□ 0.36
SND1-214ENST00000489417 CGB3P0DN86 165 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms