RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 DYNLRB2Q8TF09 96 aa11.17□□□□□ -0.62
UFD1-209ENST00000489406 WDR89Q96FK6 387 aaPredicted RBP11.17□□□□□ -0.62
UFD1-209ENST00000489406 ZNF251Q9BRH9 671 aa11.17□□□□□ -0.62
UFD1-209ENST00000489406 RIIAD1A6NNX1 92 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 MRASO14807 208 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 NBR2O15453 112 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 ZNF3P17036 446 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 ALOX5APP20292 161 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 SMIM11AP58511 58 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 DEFB114Q30KQ6 69 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 SAMD4BQ5PRF9 694 aaKnown RBP11.16□□□□□ -0.62
UFD1-209ENST00000489406 Q6P435 159 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 CD200R1LQ6Q8B3 271 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 LINC00311Q8N616 119 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 DNAAF1Q8NEP3 725 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 OR51T1Q8NGJ9 327 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 FAM162AQ96A26 154 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 FAM103A1Q9BTL3 118 aaKnown RBP11.16□□□□□ -0.62
UFD1-209ENST00000489406 COMMD4Q9H0A8 199 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 ZNF355PQ9NSJ1 428 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 PEMTQ9UBM1 199 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 LAMP5Q9UJQ1 280 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 DNAH5Q8TE73 4624 aa11.16□□□□□ -0.62
UFD1-209ENST00000489406 MYCBP2O75592 4640 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 DEGS1O15121 323 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 MAGEB3O15480 346 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 TXNL1O43396 289 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 NPPAP01160 153 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 TRBV12-3P01733 135 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 KIR2DS2P43631 304 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 ALDH3A2P51648 485 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 CX3CL1P78423 397 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 LSAMPQ13449 338 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 RPEL1Q2QD12 228 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 MOGAT2Q3SYC2 334 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 ZNF660Q6AZW8 331 aaPredicted RBP11.15□□□□□ -0.62
UFD1-209ENST00000489406 TMEM179BQ7Z7N9 219 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 PPP1R27Q86WC6 154 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 MROQ9BYG7 248 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 INTS9Q9NV88 658 aaKnown RBP11.15□□□□□ -0.62
UFD1-209ENST00000489406 RNF150Q9ULK6 438 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 SELENOKQ9Y6D0 94 aa11.15□□□□□ -0.62
UFD1-209ENST00000489406 SLC31A2O15432 143 aa11.14□□□□□ -0.63
UFD1-209ENST00000489406 OR2A4O95047 310 aa11.14□□□□□ -0.63
UFD1-209ENST00000489406 CSTBP04080 98 aaKnown RBP11.14□□□□□ -0.63
UFD1-209ENST00000489406 NCK1P16333 377 aa11.14□□□□□ -0.63
UFD1-209ENST00000489406 APOC4P55056 127 aa11.14□□□□□ -0.63
UFD1-209ENST00000489406 SF3A3Q12874 501 aaKnown RBP eCLIP11.14□□□□□ -0.63
UFD1-209ENST00000489406 ZNF829Q3KNS6 432 aaPredicted RBP11.14□□□□□ -0.63
UFD1-209ENST00000489406 DEGS2Q6QHC5 323 aa11.14□□□□□ -0.63
UFD1-209ENST00000489406 CHST4Q8NCG5 386 aa11.14□□□□□ -0.63
UFD1-209ENST00000489406 LFNGQ8NES3 379 aa11.14□□□□□ -0.63
UFD1-209ENST00000489406 UBALD1Q8TB05 177 aa11.14□□□□□ -0.63
UFD1-209ENST00000489406 RDH12Q96NR8 316 aa11.14□□□□□ -0.63
UFD1-209ENST00000489406 TTTY10Q9BZA0 68 aa11.14□□□□□ -0.63
UFD1-209ENST00000489406 CMTM6Q9NX76 183 aa11.14□□□□□ -0.63
UFD1-209ENST00000489406 NKIRAS1Q9NYS0 192 aa11.14□□□□□ -0.63
UFD1-209ENST00000489406 PEF1Q9UBV8 284 aaKnown RBP11.14□□□□□ -0.63
UFD1-209ENST00000489406 BAIAP2Q9UQB8 552 aa11.14□□□□□ -0.63
UFD1-209ENST00000489406 IGHV3-43A0A0B4J1X8 118 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 DHRS7CA6NNS2 312 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 PRR32B1ATL7 298 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 EPM2AB3EWF7 344 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 LOC110117498-PIK3R3F6TDL0 507 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 SDCBPO00560 298 aaPredicted RBP11.13□□□□□ -0.63
UFD1-209ENST00000489406 E2F6O75461 281 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 IGHV3-43DP0DP04 118 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 ATP1B3P54709 279 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 MFAP2P55001 183 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 LIPEQ05469 1076 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 LGALS9BQ3B8N2 356 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 BCL2L15Q5TBC7 163 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 OR2T33Q8NG76 320 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 OR52B4Q8NGK2 314 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 ZC4H2Q9NQZ6 224 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 CMC2Q9NRP2 79 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 ARMC1Q9NVT9 282 aa11.13□□□□□ -0.63
UFD1-209ENST00000489406 IGKV1-12A0A0C4DH73 117 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 FCN1O00602 326 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 UBE2CO00762 179 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 AIREO43918 545 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 GATBO75879 557 aaKnown RBP11.12□□□□□ -0.63
UFD1-209ENST00000489406 SOX14O95416 240 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 IGKV1D-12P01611 117 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 RBP2P50120 134 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 AKIRIN2Q53H80 203 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 Q6ZSR3 168 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 SLC25A48Q6ZT89 311 aaKnown RBP11.12□□□□□ -0.63
UFD1-209ENST00000489406 RASSF6Q6ZTQ3 369 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 ELMOD2Q8IZ81 293 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 POM121L12Q8N7R1 296 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 C8orf31Q8N9H6 132 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 FBLIM1Q8WUP2 373 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 NCOR1P1Q9H4R4 102 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 GAB2Q9UQC2 676 aa11.12□□□□□ -0.63
UFD1-209ENST00000489406 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 EDN2P20800 178 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 RIDAP52758 137 aaKnown RBP11.11□□□□□ -0.63
UFD1-209ENST00000489406 MTCP1P56278 107 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 VSNL1P62760 191 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms