RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 FAM106CPP0CH98 169 aa18.33■□□□□ 0.52
COL9A3-213ENST00000489045 WNT4P56705 351 aa18.33■□□□□ 0.52
COL9A3-213ENST00000489045 DIAPH2-AS1Q14236 149 aa18.33■□□□□ 0.52
COL9A3-213ENST00000489045 GPR176Q14439 515 aa18.33■□□□□ 0.52
COL9A3-213ENST00000489045 SLC16A12Q6ZSM3 486 aa18.33■□□□□ 0.52
COL9A3-213ENST00000489045 OR56B4Q8NH76 319 aa18.33■□□□□ 0.52
COL9A3-213ENST00000489045 NOTCH3Q9UM47 2321 aa18.33■□□□□ 0.52
COL9A3-213ENST00000489045 A0A1W2PPE3 182 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 A0A1W2PRX2 142 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 FAM90A18PA6NE21 464 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 FAM90A16PA6NEW6 464 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 FAM90A20PA6NIJ5 464 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 FAM90A9PA6NNJ1 464 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 FAM90A12PA8MX19 464 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 FAM90A5PA8MXJ8 464 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 MAS1P04201 325 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 FAM90A15PP0C7V4 464 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 FAM90A13PP0C7W8 464 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 FAM90A14PP0C7W9 464 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 FAM90A24PP0C7X0 464 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 CELP19835 753 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 CD83Q01151 205 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 GLIPR1L1Q6UWM5 242 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 CENPVQ7Z7K6 275 aaPredicted RBP18.32■□□□□ 0.52
COL9A3-213ENST00000489045 DRAM1Q8N682 238 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 OR10X1Q8NGY0 326 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 CCDC107Q8WV48 283 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 DERL3Q96Q80 235 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 MOB4Q9Y3A3 225 aa18.32■□□□□ 0.52
COL9A3-213ENST00000489045 ANKRD65E5RJM6 399 aa18.31■□□□□ 0.52
COL9A3-213ENST00000489045 M0QZK8 103 aa18.31■□□□□ 0.52
COL9A3-213ENST00000489045 GZMHP20718 246 aa18.31■□□□□ 0.52
COL9A3-213ENST00000489045 RAB7AP51149 207 aa18.31■□□□□ 0.52
COL9A3-213ENST00000489045 C9orf152Q5JTZ5 239 aa18.31■□□□□ 0.52
COL9A3-213ENST00000489045 ZNF497Q6ZNH5 498 aa18.31■□□□□ 0.52
COL9A3-213ENST00000489045 THNSL2Q86YJ6 484 aa18.31■□□□□ 0.52
COL9A3-213ENST00000489045 UBALD1Q8TB05 177 aa18.31■□□□□ 0.52
COL9A3-213ENST00000489045 ARL11Q969Q4 196 aa18.31■□□□□ 0.52
COL9A3-213ENST00000489045 FKBP14Q9NWM8 211 aa18.31■□□□□ 0.52
COL9A3-213ENST00000489045 C15orf65H3BRN8 121 aa18.3■□□□□ 0.52
COL9A3-213ENST00000489045 PIN1P1O15428 100 aa18.3■□□□□ 0.52
COL9A3-213ENST00000489045 CD1AP06126 327 aa18.3■□□□□ 0.52
COL9A3-213ENST00000489045 HES1Q14469 280 aa18.3■□□□□ 0.52
COL9A3-213ENST00000489045 TCTEX1D4Q5JR98 221 aa18.3■□□□□ 0.52
COL9A3-213ENST00000489045 KPRPQ5T749 579 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-213ENST00000489045 AWAT2Q6E213 333 aa18.3■□□□□ 0.52
COL9A3-213ENST00000489045 OR8H3Q8N146 312 aa18.3■□□□□ 0.52
COL9A3-213ENST00000489045 NANOGP1Q8N7R0 232 aa18.3■□□□□ 0.52
COL9A3-213ENST00000489045 VCXQ9H320 206 aa18.3■□□□□ 0.52
COL9A3-213ENST00000489045 RCC2Q9P258 522 aaKnown RBP18.3■□□□□ 0.52
COL9A3-213ENST00000489045 AIPO00170 330 aa18.29■□□□□ 0.52
COL9A3-213ENST00000489045 SDCBPO00560 298 aaPredicted RBP18.29■□□□□ 0.52
COL9A3-213ENST00000489045 MT-ND4P03905 459 aa18.29■□□□□ 0.52
COL9A3-213ENST00000489045 CDH26Q8IXH8 852 aa18.29■□□□□ 0.52
COL9A3-213ENST00000489045 TFAP2CQ92754 450 aa18.29■□□□□ 0.52
COL9A3-213ENST00000489045 MRPS24Q96EL2 167 aaKnown RBP18.29■□□□□ 0.52
COL9A3-213ENST00000489045 BANF2Q9H503 90 aa18.29■□□□□ 0.52
COL9A3-213ENST00000489045 SPACA1Q9HBV2 294 aa18.29■□□□□ 0.52
COL9A3-213ENST00000489045 IGHV3-43A0A0B4J1X8 118 aa18.28■□□□□ 0.52
COL9A3-213ENST00000489045 HSD17B6O14756 317 aa18.28■□□□□ 0.52
COL9A3-213ENST00000489045 ORC5O43913 435 aa18.28■□□□□ 0.52
COL9A3-213ENST00000489045 IGHV3-43DP0DP04 118 aa18.28■□□□□ 0.52
COL9A3-213ENST00000489045 TMEM11P17152 192 aa18.28■□□□□ 0.52
COL9A3-213ENST00000489045 OXLD1Q5BKU9 147 aa18.28■□□□□ 0.52
COL9A3-213ENST00000489045 FAM53AQ6NSI3 398 aaPredicted RBP18.28■□□□□ 0.52
COL9A3-213ENST00000489045 C10orf99Q6UWK7 81 aa18.28■□□□□ 0.52
COL9A3-213ENST00000489045 LYPD6Q86Y78 171 aa18.28■□□□□ 0.52
COL9A3-213ENST00000489045 OR52M1Q8NGK5 317 aa18.28■□□□□ 0.52
COL9A3-213ENST00000489045 THRSPQ92748 146 aa18.28■□□□□ 0.52
COL9A3-213ENST00000489045 GFOD1Q9NXC2 390 aa18.28■□□□□ 0.52
COL9A3-213ENST00000489045 ERGIC3Q9Y282 383 aa18.28■□□□□ 0.52
COL9A3-213ENST00000489045 TCRBV4S1A1TA0A5B7 111 aa18.27■□□□□ 0.52
COL9A3-213ENST00000489045 MCRIP1C9JLW8 97 aa18.27■□□□□ 0.52
COL9A3-213ENST00000489045 IGKV1D-33P01593 117 aa18.27■□□□□ 0.52
COL9A3-213ENST00000489045 IGKV1-33P01594 117 aa18.27■□□□□ 0.52
COL9A3-213ENST00000489045 MGMTP16455 207 aa18.27■□□□□ 0.52
COL9A3-213ENST00000489045 MAPK3P27361 379 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-213ENST00000489045 ZNF816Q0VGE8 651 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-213ENST00000489045 RAB12Q6IQ22 244 aa18.27■□□□□ 0.52
COL9A3-213ENST00000489045 NKAIN3Q8N8D7 197 aa18.27■□□□□ 0.52
COL9A3-213ENST00000489045 TMEM104Q8NE00 496 aa18.27■□□□□ 0.52
COL9A3-213ENST00000489045 OR4X2Q8NGF9 303 aa18.27■□□□□ 0.52
COL9A3-213ENST00000489045 MYDGFQ969H8 173 aa18.27■□□□□ 0.52
COL9A3-213ENST00000489045 SELENOIQ9C0D9 397 aa18.27■□□□□ 0.52
COL9A3-213ENST00000489045 ETAA1Q9NY74 926 aa18.27■□□□□ 0.52
COL9A3-213ENST00000489045 TSSC4Q9Y5U2 329 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-213ENST00000489045 CCRL2O00421 344 aa18.26■□□□□ 0.51
COL9A3-213ENST00000489045 CRTAPO75718 401 aaPredicted RBP18.26■□□□□ 0.51
COL9A3-213ENST00000489045 PRB2P02812 416 aaPredicted RBP18.26■□□□□ 0.51
COL9A3-213ENST00000489045 REG1BP48304 166 aa18.26■□□□□ 0.51
COL9A3-213ENST00000489045 LOXL3P58215 753 aa18.26■□□□□ 0.51
COL9A3-213ENST00000489045 HNF4GQ14541 408 aa18.26■□□□□ 0.51
COL9A3-213ENST00000489045 SYT6Q5T7P8 510 aaPredicted RBP18.26■□□□□ 0.51
COL9A3-213ENST00000489045 LINC00311Q8N616 119 aa18.26■□□□□ 0.51
COL9A3-213ENST00000489045 C5orf56Q8N8D9 126 aa18.26■□□□□ 0.51
COL9A3-213ENST00000489045 TRAPPC2LQ9UL33 140 aa18.26■□□□□ 0.51
COL9A3-213ENST00000489045 PEX16Q9Y5Y5 336 aa18.26■□□□□ 0.51
COL9A3-213ENST00000489045 IGHV1-3A0A0C4DH29 117 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 FAM90A10PA6NDY2 464 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 FAM90A7PA6NKC0 464 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms