RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 USF3Q68DE3 2245 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 TRAV39A0A0B4J263 110 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 DVL1O14640 695 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 FABP7O15540 132 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 IGHV2-70P01814 119 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 SCTP09683 121 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 CTXN2P0C2S0 81 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 GSTT2P0CG29 244 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 RCC1P18754 421 aaPredicted RBP6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 GZMHP20718 246 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 ERP29P30040 261 aaKnown RBP6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 SLC6A1P30531 599 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 GLIPR1P48060 266 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 P2RX3P56373 397 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 SEC61A1P61619 476 aaKnown RBP6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 OXA1LQ15070 435 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 SCGB2B2Q4G0G5 96 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 TMEM155Q4W5P6 130 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 VAX1Q5SQQ9 334 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 C6orf183Q5T699 404 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 FAAP20Q6NZ36 180 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 ZNF880Q6PDB4 577 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 TRAT1Q6PIZ9 186 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 CCBE1Q6UXH8 406 aaPredicted RBP6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 NLRC3Q7RTR2 1065 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 NRARPQ7Z6K4 114 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 GAPTQ8N292 157 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 SPICQ8N5J4 248 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 TPRX1Q8N7U7 411 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 OR8B3Q8NGG8 313 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 OR4D10Q8NGI6 311 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 OR56B4Q8NH76 319 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 MRGPRDQ8TDS7 321 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 CHPT1Q8WUD6 406 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 IGFBPL1Q8WX77 278 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 SNAPC3Q92966 411 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 COQ2Q96H96 371 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 OR8B2Q96RD0 313 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 PRRT1Q99946 306 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 LIME1Q9H400 295 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 NCOR1P1Q9H4R4 102 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 EHFQ9NZC4 300 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 OR6C3Q9NZP0 311 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 COPZ2Q9P299 210 aa6.29□□□□□ -1.4
APOBEC3A-203ENST00000488758 ANKRD17O75179 2603 aaKnown RBP6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 IGKV1D-8A0A087WSZ0 117 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 TRGV10A0A0A0MS01 117 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 A0A1B0GW55 424 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 hADV38S2A0JD32 116 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 ODAMA1E959 279 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 CEACAM18A8MTB9 384 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 SDCBPO00560 298 aaPredicted RBP6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 IGHV4-39P01824 125 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 TCRBP04435 133 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 WNT2P09544 360 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 DUX4L2P0CJ85 424 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 DUX4L3P0CJ86 424 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 DUX4L4P0CJ87 422 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 DUX4L5P0CJ88 424 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 DUX4L6P0CJ89 424 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 DUX4L7P0CJ90 424 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 OR5H8P0DN80 308 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 SELLP14151 372 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 RPS2P15880 293 aaKnown RBP6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 SPNP16150 400 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 DNASE1P24855 282 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 IL2RGP31785 369 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 GLP1RP43220 463 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 CCR6P51684 374 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 HLA-DRB3P79483 266 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 PAX5Q02548 391 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 DUX4L9Q6RFH8 374 aaPredicted RBP6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 CLEC2AQ6UVW9 174 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 C8orf86Q6ZUL3 223 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 OVCH2Q7RTZ1 564 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 PRR18Q8N4B5 295 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 ARRDC1Q8N5I2 433 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 ZNF525Q8N782 197 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 DUSP18Q8NEJ0 188 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 OR51S1Q8NGJ8 323 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 OR4A4PQ8NGN8 299 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 OR6F1Q8NGZ6 308 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 IL1F10Q8WWZ1 152 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 H1FXQ92522 213 aaKnown RBP6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 NRGNQ92686 78 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 ARL11Q969Q4 196 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 GALMQ96C23 342 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 NEIL1Q96FI4 390 aaPredicted RBP6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 PERPQ96FX8 193 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 LURAP1Q96LR2 239 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 SLC6A7Q99884 636 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 SLC25A21Q9BQT8 299 aaPredicted RBP6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 GINS4Q9BRT9 223 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 MMP28Q9H239 520 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 TAF9BQ9HBM6 251 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 RAB9BQ9NP90 201 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 MBNL3Q9NUK0 354 aaKnown RBP6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 DUX4Q9UBX2 424 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 NUBP2Q9Y5Y2 271 aa6.28□□□□□ -1.4
APOBEC3A-203ENST00000488758 AKAP6Q13023 2319 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms