RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 EFNB3Q15768 340 aa10.67□□□□□ -0.7
NELFE-209ENST00000488426 ZFP69Q49AA0 526 aa10.67□□□□□ -0.7
NELFE-209ENST00000488426 CCDC28AQ8IWP9 274 aa10.67□□□□□ -0.7
NELFE-209ENST00000488426 MUC20Q8N307 709 aaPredicted RBP10.67□□□□□ -0.7
NELFE-209ENST00000488426 GCSAMQ8N6F7 178 aa10.67□□□□□ -0.7
NELFE-209ENST00000488426 TMEM185AQ8NFB2 350 aa10.67□□□□□ -0.7
NELFE-209ENST00000488426 OR52B4Q8NGK2 314 aa10.67□□□□□ -0.7
NELFE-209ENST00000488426 LILRB1Q8NHL6 650 aaPredicted RBP10.67□□□□□ -0.7
NELFE-209ENST00000488426 FYTTD1Q96QD9 318 aaKnown RBP10.67□□□□□ -0.7
NELFE-209ENST00000488426 ZNF2Q9BSG1 426 aaPredicted RBP10.67□□□□□ -0.7
NELFE-209ENST00000488426 MEIKINA0A087WXM9 373 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 OR5H14A6NHG9 310 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.66□□□□□ -0.7
NELFE-209ENST00000488426 EGR1P18146 543 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 ZBTB25P24278 435 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 APOBEC3AP31941 199 aaPredicted RBP10.66□□□□□ -0.7
NELFE-209ENST00000488426 B2MP61769 119 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 DHRS2Q13268 280 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 SPRNQ5BIV9 151 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 C17orf107Q6ZR85 190 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 LYG2Q86SG7 212 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 OR11L1Q8NGX0 322 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 TRAF4Q9BUZ4 470 aaPredicted RBP10.66□□□□□ -0.7
NELFE-209ENST00000488426 GCM1Q9NP62 436 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 RNF7Q9UBF6 113 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 WIPI2Q9Y4P8 454 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 ARID1AO14497 2285 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 RFPL4AA6NLU0 287 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 DEFB108AA8MXU0 73 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 RFPL4AL1F8VTS6 287 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 HLA-AP01891 365 aaKnown RBP10.66□□□□□ -0.7
NELFE-209ENST00000488426 CXCL3P19876 107 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 CEBPDP49716 269 aaPredicted RBP10.66□□□□□ -0.7
NELFE-209ENST00000488426 HLA-DRB3P79483 266 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 TAGLNQ01995 201 aaKnown RBP10.66□□□□□ -0.7
NELFE-209ENST00000488426 DHODHQ02127 395 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 TMEM128Q5BJH2 165 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 SPNS3Q6ZMD2 512 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 OR4A4PQ8NGN8 299 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 GRPEL2Q8TAA5 225 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 PLPPR1Q8TBJ4 325 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 ZFAND1Q8TCF1 268 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 EGLN1Q9GZT9 426 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 C5orf66Q9H5L9 145 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 SLA2Q9H6Q3 261 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 MGAT4CQ9UBM8 478 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 DNAJB11Q9UBS4 358 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 ZNF222Q9UK12 451 aa10.66□□□□□ -0.7
NELFE-209ENST00000488426 C14orf166Q9Y224 244 aaKnown RBP10.66□□□□□ -0.7
NELFE-209ENST00000488426 TMEM30CPA0ZSE6 113 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 B9A039 149 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 TRIM77I1YAP6 450 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 PSPNO60542 156 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 TK1P04183 234 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 PSG2P11465 335 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 PGAM2P15259 253 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 FCGR2CP31995 323 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 PRDX2P32119 198 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 UCP3P55916 312 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 PAX5Q02548 391 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 PPP1R1AQ13522 171 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 SLC35E4Q6ICL7 350 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 C20orf204Q6ZNR8 217 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 C12orf45Q8N5I9 185 aaPredicted RBP10.65□□□□□ -0.7
NELFE-209ENST00000488426 ADAD2Q8NCV1 583 aaKnown RBP10.65□□□□□ -0.7
NELFE-209ENST00000488426 OR2AK2Q8NG84 335 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 DMRTB1Q96MA1 342 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 TMEM204Q9BSN7 226 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 MS4A5Q9H3V2 200 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 MBNL3Q9NUK0 354 aaKnown RBP10.65□□□□□ -0.7
NELFE-209ENST00000488426 PPP1R3CQ9UQK1 317 aa10.65□□□□□ -0.7
NELFE-209ENST00000488426 C9orf170A2RU37 121 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 DUS4LO95620 317 aaKnown RBP10.64□□□□□ -0.71
NELFE-209ENST00000488426 DIRAS3O95661 229 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 C1QBP02746 253 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 CTSDP07339 412 aaPredicted RBP10.64□□□□□ -0.71
NELFE-209ENST00000488426 SCTP09683 121 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 IRF2P14316 349 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 AKR1C4P17516 323 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 LOXP28300 417 aaPredicted RBP10.64□□□□□ -0.71
NELFE-209ENST00000488426 AP2S1P53680 142 aaPredicted RBP10.64□□□□□ -0.71
NELFE-209ENST00000488426 HERV-K104P61576 105 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 SEC61A1P61619 476 aaKnown RBP10.64□□□□□ -0.71
NELFE-209ENST00000488426 IL13RA1P78552 427 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 COL10A1Q03692 680 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 ATXN7L3Q14CW9 347 aaPredicted RBP10.64□□□□□ -0.71
NELFE-209ENST00000488426 IGSF11Q5DX21 431 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 MOB3AQ96BX8 217 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 RTBDNQ9BSG5 229 aaPredicted RBP10.64□□□□□ -0.71
NELFE-209ENST00000488426 CABLES2Q9BTV7 478 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 ZNF436Q9C0F3 470 aaPredicted RBP10.64□□□□□ -0.71
NELFE-209ENST00000488426 FXYD6Q9H0Q3 95 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 DYNLRB1Q9NP97 96 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 TRAPPC2LQ9UL33 140 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 PCDHB10Q9UN67 800 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 FLNAP21333 2647 aaKnown RBP10.64□□□□□ -0.71
NELFE-209ENST00000488426 TSPAN9O75954 239 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 ZNF728P0DKX0 622 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 OR3A1P47881 315 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 HOXA4Q00056 320 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms