RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 OR1L1Q8NH94 360 aa13.95□□□□□ -0.18
SHROOM1-205ENST00000488072 DMRTB1Q96MA1 342 aa13.95□□□□□ -0.18
SHROOM1-205ENST00000488072 SESN1Q9Y6P5 492 aa13.95□□□□□ -0.18
SHROOM1-205ENST00000488072 KBTBD11-OT1A0A1B0GTJ5 212 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 MEIOCA2RUB1 952 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 FUOMA2VDF0 154 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 C12orf77C9JDV5 145 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 GABARAPO95166 117 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 GNB3P16520 340 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 NFYBP25208 207 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 UBE2E1P51965 193 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 SPCS2Q15005 226 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 C9orf139Q6ZV77 190 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 IZUMO1Q8IYV9 350 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 GAPTQ8N292 157 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 SLC25A38Q96DW6 304 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 KIRREL1Q96J84 757 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 URM1Q9BTM9 101 aaKnown RBP13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 ATG5Q9H1Y0 275 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 TMEM133Q9H2Q1 129 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 SPACA1Q9HBV2 294 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 PLEKHJ1Q9NW61 149 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 TAS2R3Q9NYW6 316 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 OR6C3Q9NZP0 311 aa13.94□□□□□ -0.18
SHROOM1-205ENST00000488072 A0A1W2PPH5 198 aa13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 ZNF729A6NN14 1252 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 IL1AP01583 271 aa13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 ARG1P05089 322 aa13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 FPR2P25090 351 aa13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 KCNJ3P48549 501 aa13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 PAX5Q02548 391 aa13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 DYNC1I2Q13409 638 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 PLA1AQ53H76 456 aa13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 HEPN1Q6WQI6 88 aa13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 Q6ZTK2 550 aa13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 PRR18Q8N4B5 295 aa13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 ARL11Q969Q4 196 aa13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 RBMXL1Q96E39 390 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 IDI2-AS1Q9NZ38 188 aa13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 TRAPPC2LQ9UL33 140 aa13.93□□□□□ -0.18
SHROOM1-205ENST00000488072 IGHV2-26A0A0B4J1V2 119 aa13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 ODF3BA8MYP8 253 aa13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 NPIPB11E5RHQ5 1161 aa13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 RAB6AP20340 208 aa13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 RPL5P46777 297 aaKnown RBP13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 MADCAM1Q13477 382 aa13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 RBM39Q14498 530 aaKnown RBP13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 NCR3LG1Q68D85 454 aa13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 TEX29Q8N6K0 151 aa13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 OR10R2Q8NGX6 335 aa13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 SETD6Q8TBK2 473 aa13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 MAFIPQ8WZ33 124 aa13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 GAL3ST2Q9H3Q3 398 aa13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 NCOR1P1Q9H4R4 102 aa13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 HEXA-AS1Q9H8Q6 139 aa13.92□□□□□ -0.18
SHROOM1-205ENST00000488072 DNAJC9-AS1A6NH13 148 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 SLC31A2O15432 143 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 HOXA3O43365 443 aaPredicted RBP13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 TCF21O43680 179 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 IGHV4-59P01825 116 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 HBZP02008 142 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 PTHLHP12272 177 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 GNG10P50151 68 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 BAMBIQ13145 260 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 GNMTQ14749 295 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 KRTAP24-1Q3LI83 254 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 ABHD12Q8N2K0 398 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 ZNF565Q8N9K5 539 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 OR52L2PQ8NGH6 319 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 OR56B1Q8NGI3 324 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 OR10V1Q8NGI7 309 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 ZDHHC16Q969W1 377 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 SLC25A46Q96AG3 418 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 MDFIQ99750 246 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 DCSTAMPQ9H295 470 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 TAF9BQ9HBM6 251 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 RHBDL2Q9NX52 303 aa13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 ZNF230Q9UIE0 474 aaPredicted RBP13.91□□□□□ -0.18
SHROOM1-205ENST00000488072 MFNGO00587 321 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 NAPSAO96009 420 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 RBP4P02753 201 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 GLAP06280 429 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 MELTFP08582 738 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 RAB13P51153 203 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 HILS1P60008 231 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 GUCA2AQ02747 115 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 DIAPH2-AS1Q14236 149 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 FBLN7Q53RD9 439 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 ZNF626Q68DY1 528 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 OR11H6Q8NGC7 330 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 OR4P4Q8NGL7 312 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 OR13D1Q8NGV5 346 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 ZNF418Q8TF45 676 aaPredicted RBP13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 RAB3CQ96E17 227 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 LINC00574Q9H8X3 128 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 CHMP1AQ9HD42 196 aaPredicted RBP13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 HSF4Q9ULV5 492 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 CEPT1Q9Y6K0 416 aa13.9□□□□□ -0.18
SHROOM1-205ENST00000488072 IGKV1D-8A0A087WSZ0 117 aa13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 hCG_1809904A0A1W2PP81 198 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms