RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 FAM19A3Q7Z5A8 133 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 SYS1Q8N2H4 156 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 GATD1Q8NB37 220 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 ZNF563Q8TA94 476 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 NELFBQ8WX92 580 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 CACNG8Q8WXS5 425 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 CLDN23Q96B33 292 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 CAPZA3Q96KX2 299 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 PITX2Q99697 317 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 TM6SF2Q9BZW4 377 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 CRLF2Q9HC73 371 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 ANKHQ9HCJ1 492 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 KCNIP2Q9NS61 270 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 DDX18Q9NVP1 670 aaKnown RBP0.49□□□□□ -2.33
SMC4-219ENST00000487747 ADAMTSL1Q8N6G6 1762 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 A0A1W2PRG6 482 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 FAM183AA6NL82 134 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 A8MWP6 167 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 F8VP50 259 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 IGHV3-30-3P0DP02 117 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 GZMBP10144 247 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 CPMP14384 443 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 CPN2P22792 545 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 ATP5J2P56134 94 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 RHOAP61586 193 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 HBG1P69891 147 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 HBG2P69892 147 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 ZNF117Q03924 483 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 FAM162BQ5T6X4 162 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 LAMTOR1Q6IAA8 161 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 FAHD1Q6P587 224 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 OR4K17Q8NGC6 315 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 OR13C9Q8NGT0 318 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 OR6K2Q8NGY2 324 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 GTF2H4Q92759 462 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 KIAA1143Q96AT1 154 aaPredicted RBP0.48□□□□□ -2.33
SMC4-219ENST00000487747 ZNF396Q96N95 335 aaPredicted RBP0.48□□□□□ -2.33
SMC4-219ENST00000487747 PRSS27Q9BQR3 290 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 UTP23Q9BRU9 249 aaKnown RBP0.48□□□□□ -2.33
SMC4-219ENST00000487747 C1QTNF6Q9BXI9 259 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 EBPLQ9BY08 206 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 GAL3ST2Q9H3Q3 398 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 SMDT1Q9H4I9 107 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 C16orf95Q9H693 158 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 RMND1Q9NWS8 449 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 STMN3Q9NZ72 180 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 PRO2289Q9P1D8 64 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 POMPQ9Y244 141 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 MINOS1-NBL1R4GNA1 71 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 PXDNLA1KZ92 1463 aa0.48□□□□□ -2.33
SMC4-219ENST00000487747 RTEL1-TNFRSF6BF6WH68 1400 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 KIF27Q86VH2 1401 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 IGLV3-9A0A075B6K5 115 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 ARGFXA6NJG6 315 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 E7EWF7 191 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 FNDC10F2Z333 226 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 CDIPTO14735 213 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 TRAPPC3O43617 180 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 HMMRO75330 724 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 EPPINO95925 133 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 MBP02144 154 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 ZNF3P17036 446 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 SPAM1P38567 509 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 MAGEA3P43357 314 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 DSTNP60981 165 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 STX4Q12846 297 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 HSP90AA4PQ58FG1 418 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 DGAT2L6Q6ZPD8 337 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 C10orf107Q8IVU9 208 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 SUN5Q8TC36 379 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 LGALS14Q8TCE9 139 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 SPPL2BQ8TCT7 592 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 ZMYND19Q96E35 227 aaPredicted RBP0.47□□□□□ -2.33
SMC4-219ENST00000487747 OR52B2Q96RD2 323 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 UPK3BQ9BT76 320 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 ZNF471Q9BX82 626 aaPredicted RBP0.47□□□□□ -2.33
SMC4-219ENST00000487747 BEX2Q9BXY8 128 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 VCX3AQ9NNX9 186 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 FBXL3Q9UKT7 428 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 MYO15BQ96JP2 1530 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 MYO5BQ9ULV0 1848 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 RGS12O14924 1447 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 PLCH2O75038 1416 aa0.47□□□□□ -2.33
SMC4-219ENST00000487747 NYNRINQ9P2P1 1898 aaKnown RBP0.46□□□□□ -2.34
SMC4-219ENST00000487747 PTPRJQ12913 1337 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 DSCAML1Q8TD84 2053 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 SIGLEC16A6NMB1 481 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 C8orf87E5RJ46 101 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 I3L4J1 428 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 FGF16O43320 207 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 SPOPO43791 374 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 SHOX2O60902 331 aaPredicted RBP0.46□□□□□ -2.34
SMC4-219ENST00000487747 ZMPSTE24O75844 475 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 SC5DO75845 299 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 CRYGDP07320 174 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 LYNX1P0DP58 116 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 PYCR1P32322 319 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 DNASE1L1P49184 302 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 MP68P56378 58 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 RWDD2BP57060 319 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms