RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 C14orf166Q9Y224 244 aaKnown RBP7.9□□□□□ -1.14
SF3B1-211ENST00000487698 IGHV3OR15-7A0A075B7D8 119 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 TRAV39A0A0B4J263 110 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 GOSR2O14653 212 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 BET1O15155 118 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 SLC22A5O76082 557 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 ERP29P30040 261 aaKnown RBP7.9□□□□□ -1.15
SF3B1-211ENST00000487698 RAP2BP61225 183 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 AESQ08117 197 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 KCNJ8Q15842 424 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 SWI5Q1ZZU3 235 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 FAM201AQ5SY85 155 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 DCAF12L2Q5VW00 463 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 TEX36Q5VZQ5 186 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 STUMQ69YW2 141 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 CLEC18BQ6UXF7 455 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 TGIF2LYQ8IUE0 185 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 H1FOOQ8IZA3 346 aaPredicted RBP7.9□□□□□ -1.15
SF3B1-211ENST00000487698 ASCC1Q8N9N2 400 aaKnown RBP7.9□□□□□ -1.15
SF3B1-211ENST00000487698 OR5M8Q8NGP6 311 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 TOMM40LQ969M1 308 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 PIK3IP1Q96FE7 263 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 KIRREL1Q96J84 757 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 PHB2Q99623 299 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 RSRP1Q9BUV0 290 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 DCAF16Q9NXF7 216 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 KIF25Q9UIL4 384 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 TRAPPC2LQ9UL33 140 aa7.9□□□□□ -1.15
SF3B1-211ENST00000487698 A0A0B4J2A0 478 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 CRYM-AS1A6NIL9 109 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 SIX6O95475 246 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 CYB5R3P00387 301 aaPredicted RBP7.89□□□□□ -1.15
SF3B1-211ENST00000487698 FXYD4P59646 89 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 HERV-K104P61576 105 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 SRSF4Q08170 494 aaKnown RBP7.89□□□□□ -1.15
SF3B1-211ENST00000487698 LPCAT3Q6P1A2 487 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 SLC38A6Q8IZM9 456 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 UXS1Q8NBZ7 420 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 CASTOR1Q8WTX7 329 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 ASB13Q8WXK3 278 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 WDR89Q96FK6 387 aaPredicted RBP7.89□□□□□ -1.15
SF3B1-211ENST00000487698 SDSLQ96GA7 329 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 SNX22Q96L94 193 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 EGLN1Q9GZT9 426 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 CLEC4MQ9H2X3 399 aaPredicted RBP7.89□□□□□ -1.15
SF3B1-211ENST00000487698 MS4A5Q9H3V2 200 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 SAP30LQ9HAJ7 183 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 DYNLRB1Q9NP97 96 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 SHPKQ9UHJ6 478 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 OPN4Q9UHM6 478 aa7.89□□□□□ -1.15
SF3B1-211ENST00000487698 DOPEY1Q5JWR5 2465 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 IGKV1D-13A0A0B4J2D9 117 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 IGKV1-13P0DP09 117 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 MUC1P15941 1255 aaPredicted RBP7.88□□□□□ -1.15
SF3B1-211ENST00000487698 PIGPP57054 158 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 ANKRD55Q3KP44 614 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 KRBOX4Q5JUW0 171 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 LDLRAD3Q86YD5 345 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 OR11H4Q8NGC9 324 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 OR2T35Q8NGX2 323 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 ZNF486Q96H40 463 aaPredicted RBP7.88□□□□□ -1.15
SF3B1-211ENST00000487698 HYLS1Q96M11 299 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 CHIAQ9BZP6 476 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 RANBP3Q9H6Z4 567 aaPredicted RBP7.88□□□□□ -1.15
SF3B1-211ENST00000487698 TAF9BQ9HBM6 251 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 SLC2A9Q9NRM0 540 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 MAB21L2Q9Y586 359 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 FAM172BPA6NC97 362 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 OOEPA6NGQ2 149 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 LRRC30A6NM36 301 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 C12orf77C9JDV5 145 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 K7N7A8 449 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 MGST3O14880 152 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 IRF2P14316 349 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 GABRA2P47869 451 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 GLIPR1P48060 266 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 SLC9A3R2Q15599 337 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 Q5BKY6 102 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 LIN54Q6MZP7 749 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 C11orf88Q6PI97 169 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 MUC15Q8N387 334 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 ZNF561Q8N587 486 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 OR10J5Q8NHC4 309 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 GALNT14Q96FL9 552 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 BBC3Q96PG8 261 aaPredicted RBP7.88□□□□□ -1.15
SF3B1-211ENST00000487698 GAFA1Q96PS6 74 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 OR1A1Q9P1Q5 309 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 OR2W1Q9Y3N9 320 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 FLNCQ14315 2725 aa7.88□□□□□ -1.15
SF3B1-211ENST00000487698 USP9XQ93008 2570 aaPredicted RBP7.87□□□□□ -1.15
SF3B1-211ENST00000487698 TMEM178BH3BS89 294 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 RGS11O94810 467 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 IFNA2P01563 188 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 HEXAP06865 529 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 IGFBP2P18065 325 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 DNASE1P24855 282 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 GNRHRP30968 328 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 RND3P61587 244 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 ABCA11PQ4W5N1 156 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 LAMTOR1Q6IAA8 161 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms