RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 GCDHQ92947 438 aaPredicted RBP8.75□□□□□ -1.01
TOP3B-216ENST00000487485 PHF21AQ96BD5 680 aa8.75□□□□□ -1.01
TOP3B-216ENST00000487485 UPRTQ96BW1 309 aa8.75□□□□□ -1.01
TOP3B-216ENST00000487485 SLC25A38Q96DW6 304 aa8.75□□□□□ -1.01
TOP3B-216ENST00000487485 TBX15Q96SF7 602 aa8.75□□□□□ -1.01
TOP3B-216ENST00000487485 METTL8Q9H825 291 aaKnown RBP8.75□□□□□ -1.01
TOP3B-216ENST00000487485 SIRT7Q9NRC8 400 aa8.75□□□□□ -1.01
TOP3B-216ENST00000487485 TAS2R3Q9NYW6 316 aa8.75□□□□□ -1.01
TOP3B-216ENST00000487485 COMMD3Q9UBI1 195 aa8.75□□□□□ -1.01
TOP3B-216ENST00000487485 CMYA5Q8N3K9 4069 aa8.75□□□□□ -1.01
TOP3B-216ENST00000487485 A0A075B6Q4 140 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 SMIM31A0A1B0GVY4 71 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 ZNF729A6NN14 1252 aaPredicted RBP8.74□□□□□ -1.01
TOP3B-216ENST00000487485 SCGNO76038 276 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 CGB3P0DN86 165 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 CGB7P0DN87 165 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 GNB3P16520 340 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 GZMHP20718 246 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 PRTN3P24158 256 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 GLP1RP43220 463 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 DYNC1I2Q13409 638 aaKnown RBP8.74□□□□□ -1.01
TOP3B-216ENST00000487485 C17orf58Q2M2W7 97 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 CDNFQ49AH0 187 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 PDLIM3Q53GG5 364 aaPredicted RBP8.74□□□□□ -1.01
TOP3B-216ENST00000487485 UBE2NLQ5JXB2 153 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 OLFML2AQ68BL7 652 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 MZT2AQ6P582 158 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 GAPTQ8N292 157 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 SAMD12Q8N8I0 201 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 MRPL30Q8TCC3 161 aaKnown RBP8.74□□□□□ -1.01
TOP3B-216ENST00000487485 MRGPRDQ8TDS7 321 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 AP3S1Q92572 193 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 LHX4Q969G2 390 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 S100A16Q96FQ6 103 aaKnown RBP8.74□□□□□ -1.01
TOP3B-216ENST00000487485 ABCG5Q9H222 651 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 GAL3ST2Q9H3Q3 398 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 ZMAT3Q9HA38 289 aaKnown RBP8.74□□□□□ -1.01
TOP3B-216ENST00000487485 CHMP1AQ9HD42 196 aaPredicted RBP8.74□□□□□ -1.01
TOP3B-216ENST00000487485 DIABLOQ9NR28 239 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 NDUFA13Q9P0J0 144 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 AK3Q9UIJ7 227 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 TRAPPC2LQ9UL33 140 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 KCNK7Q9Y2U2 307 aa8.74□□□□□ -1.01
TOP3B-216ENST00000487485 PRKDCP78527 4128 aaKnown RBP8.73□□□□□ -1.01
TOP3B-216ENST00000487485 IGHV3OR16-10A0A075B7F0 116 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 TRAV40A0A0B4J280 105 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 CENPVL3A0A0U1RRI6 287 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 KBTBD11-OT1A0A1B0GTJ5 212 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 ZNF701M0R085 212 aaPredicted RBP8.73□□□□□ -1.01
TOP3B-216ENST00000487485 MFNGO00587 321 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 MMP23AO75900 390 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 FSHBP01225 129 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 RBP4P02753 201 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 IGHV1-8P0DP01 117 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 IGHV4-38-2P0DP08 117 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 HIST1H1DP16402 221 aaKnown RBP8.73□□□□□ -1.01
TOP3B-216ENST00000487485 RCC1P18754 421 aaPredicted RBP8.73□□□□□ -1.01
TOP3B-216ENST00000487485 OMGP23515 440 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 PRB3Q04118 309 aaPredicted RBP8.73□□□□□ -1.01
TOP3B-216ENST00000487485 ARL6IP1Q15041 203 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 KLF17Q5JT82 389 aaPredicted RBP8.73□□□□□ -1.01
TOP3B-216ENST00000487485 ZNF782Q6ZMW2 699 aaPredicted RBP8.73□□□□□ -1.01
TOP3B-216ENST00000487485 PDZD9Q8IXQ8 264 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 FAM216AQ8WUB2 273 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 TNFRSF14Q92956 283 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 DGCR14Q96DF8 476 aaKnown RBP8.73□□□□□ -1.01
TOP3B-216ENST00000487485 CMTM3Q96MX0 182 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 CMSS1Q9BQ75 279 aaKnown RBP8.73□□□□□ -1.01
TOP3B-216ENST00000487485 RIMS4Q9H426 269 aaPredicted RBP8.73□□□□□ -1.01
TOP3B-216ENST00000487485 UNKLQ9H9P5 680 aaKnown RBP8.73□□□□□ -1.01
TOP3B-216ENST00000487485 CALYQ9NYX4 217 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 VWFP04275 2813 aa8.73□□□□□ -1.01
TOP3B-216ENST00000487485 TRAV18A0A075B6X5 111 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 A0A0A6YYH2 397 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 A6NJ64 397 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 SERPINE3A8MV23 424 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 RNASEK-C17orf49H0YIS7 233 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 ORC5O43913 435 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 HPGDSO60760 199 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 CLPXO76031 633 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 NAPSAO96009 420 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 APOA1P02647 267 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 EIF4EP06730 217 aaKnown RBP8.72□□□□□ -1.01
TOP3B-216ENST00000487485 CD3GP09693 182 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 CDK2P24941 298 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 SSTR5P35346 364 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 MRPS15P82914 257 aaKnown RBP8.72□□□□□ -1.01
TOP3B-216ENST00000487485 DEFA6Q01524 100 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 KLRD1Q13241 179 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 ARFRP1Q13795 201 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 ZNF260Q3ZCT1 412 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 C6orf183Q5T699 404 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 PRAMEF5Q5TYX0 476 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 GPR157Q5UAW9 335 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 NCR3LG1Q68D85 454 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 OR52W1Q6IF63 320 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 HEPN1Q6WQI6 88 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 DTX3Q8N9I9 347 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 RFESDQ8TAC1 157 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 SETD6Q8TBK2 473 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms