RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 EBI3Q14213 229 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 CCDC58Q4VC31 144 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 NHLRC3Q5JS37 347 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 OR2G6Q5TZ20 316 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 OR2W3Q7Z3T1 314 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 OR52N1Q8NH53 320 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 UBALD1Q8TB05 177 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 CCDC107Q8WV48 283 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 TMEM106AQ96A25 262 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 TMEM138Q9NPI0 162 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 IL36GQ9NZH8 169 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 IGHV3-72A0A0B4J1Y9 119 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 IGHV1-3A0A0C4DH29 117 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 A0A1W2PP11 408 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 TMEM30CPA0ZSE6 113 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 CCRL2O00421 344 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 HSD17B6O14756 317 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 OR7C1O76099 320 aaPredicted RBP9.62□□□□□ -0.87
VPS16-208ENST00000487461 MT-ND4P03905 459 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 CSTBP04080 98 aaKnown RBP9.62□□□□□ -0.87
VPS16-208ENST00000487461 GAPDHP04406 335 aaKnown RBP9.62□□□□□ -0.87
VPS16-208ENST00000487461 CD2P06729 351 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 DCKP27707 260 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 BDKRB2P30411 391 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 ZNF93P35789 620 aaPredicted RBP9.62□□□□□ -0.87
VPS16-208ENST00000487461 VAX1Q5SQQ9 334 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 DDI2Q5TDH0 399 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 C8orf86Q6ZUL3 223 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 MOB3BQ86TA1 216 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 PQLC1Q8N2U9 271 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 LINC00311Q8N616 119 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 OR51D1Q8NGF3 324 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 OR13C5Q8NGS8 318 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 ARL11Q969Q4 196 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 EAF1Q96JC9 268 aaPredicted RBP9.62□□□□□ -0.87
VPS16-208ENST00000487461 ZFP57Q9NU63 452 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 BABAM2Q9NXR7 383 aa9.62□□□□□ -0.87
VPS16-208ENST00000487461 SDCBPO00560 298 aaPredicted RBP9.61□□□□□ -0.87
VPS16-208ENST00000487461 LALBAP00709 142 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 IGFBP3P17936 291 aaPredicted RBP9.61□□□□□ -0.87
VPS16-208ENST00000487461 SERPINA2P20848 420 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 MYCNOSP40205 109 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 PPP3R1P63098 170 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 SLC22A6Q4U2R8 563 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 ATAD3CQ5T2N8 411 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 C11orf87Q6NUJ2 197 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 TMPRSS11AQ6ZMR5 421 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 SLC35E3Q7Z769 313 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 STPG2Q8N412 459 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 Q8N6K4 173 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 OR52M1Q8NGK5 317 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 GHSRQ92847 366 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 ST6GALNAC6Q969X2 333 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 RBMXL1Q96E39 390 aaKnown RBP9.61□□□□□ -0.87
VPS16-208ENST00000487461 P2RX4Q99571 388 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 PLSCR3Q9NRY6 295 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 GFOD1Q9NXC2 390 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 CLEC2DQ9UHP7 191 aa9.61□□□□□ -0.87
VPS16-208ENST00000487461 KMT2CQ8NEZ4 4911 aaKnown RBP9.6□□□□□ -0.87
VPS16-208ENST00000487461 IGHV3-43A0A0B4J1X8 118 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 TRBV5-5A0A0J9YX44 114 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 MAGEA13PA6NCF6 341 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 NCBP2LA6PVI3 153 aaKnown RBP9.6□□□□□ -0.87
VPS16-208ENST00000487461 NUDT19A8MXV4 375 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 ZNF736B4DX44 427 aaPredicted RBP9.6□□□□□ -0.87
VPS16-208ENST00000487461 ORC5O43913 435 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 GPX5O75715 221 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 IGHV3-43DP0DP04 118 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 GPR12P47775 334 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 RPS11P62280 158 aaKnown RBP eCLIP9.6□□□□□ -0.87
VPS16-208ENST00000487461 SLC35B1P78383 322 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 MPV17LQ2QL34 196 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 DMKNQ6E0U4 476 aaPredicted RBP9.6□□□□□ -0.87
VPS16-208ENST00000487461 ZNF497Q6ZNH5 498 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 LINC00596Q86U02 117 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 TGIF2LXQ8IUE1 241 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 FOXRED2Q8IWF2 684 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 IZUMO1Q8IYV9 350 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 COMMD1Q8N668 190 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 C8orf31Q8N9H6 132 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 Q8N9W7 124 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 ZNF555Q8NEP9 628 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 OR2T10Q8NGZ9 312 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 SMIM19Q96E16 107 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 DUX3Q96PT4 197 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 S100A13Q99584 98 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 ZNF184Q99676 751 aaPredicted RBP9.6□□□□□ -0.87
VPS16-208ENST00000487461 GPR61Q9BZJ8 451 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 ABCG5Q9H222 651 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 PAK1IP1Q9NWT1 392 aaPredicted RBP9.6□□□□□ -0.87
VPS16-208ENST00000487461 LRRC42Q9Y546 428 aa9.6□□□□□ -0.87
VPS16-208ENST00000487461 TRAV8-7A0A075B6U6 113 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 SLC31A2O15432 143 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 ZNF780AO75290 641 aaPredicted RBP9.59□□□□□ -0.87
VPS16-208ENST00000487461 BAG2O95816 211 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 GTF2F2P13984 249 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 CD1BP29016 333 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 SLC6A1P30531 599 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 ZNF134P52741 427 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 PNLIPRP3Q17RR3 467 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms