RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 LIN54Q6MZP7 749 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 C20orf204Q6ZNR8 217 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 Q6ZPA2 131 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 C17orf107Q6ZR85 190 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 FAM185AQ8N0U4 392 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 MUC20Q8N307 709 aaPredicted RBP5.16□□□□□ -1.58
VAMP3-203ENST00000487194 CD177Q8N6Q3 437 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 ZNF565Q8N9K5 539 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 CCDC71LQ8N9Z2 235 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 OR2AK2Q8NG84 335 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 OR11H7Q8NGC8 314 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 OR5T2Q8NGG2 359 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 OR10J5Q8NHC4 309 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 CAPSLQ8WWF8 208 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 SDSLQ96GA7 329 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 KIRREL1Q96J84 757 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 LURAP1Q96LR2 239 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 RTBDNQ9BSG5 229 aaPredicted RBP5.16□□□□□ -1.58
VAMP3-203ENST00000487194 TRAF4Q9BUZ4 470 aaPredicted RBP5.16□□□□□ -1.58
VAMP3-203ENST00000487194 ZNF436Q9C0F3 470 aaPredicted RBP5.16□□□□□ -1.58
VAMP3-203ENST00000487194 RAB1BQ9H0U4 201 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 FAM234AQ9H0X4 552 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 DNTTIP1Q9H147 329 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 C5orf66Q9H5L9 145 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 ZNF665Q9H7R5 613 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 RANGRFQ9HD47 186 aaPredicted RBP5.16□□□□□ -1.58
VAMP3-203ENST00000487194 CBLN4Q9NTU7 201 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 MGAT4CQ9UBM8 478 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 SHPKQ9UHJ6 478 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 ZNF222Q9UK12 451 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 PPIAL4AQ9Y536 164 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 PKDREJQ9NTG1 2253 aa5.16□□□□□ -1.58
VAMP3-203ENST00000487194 CFAP46Q8IYW2 2715 aa5.15□□□□□ -1.58
VAMP3-203ENST00000487194 ABCA4P78363 2273 aa5.15□□□□□ -1.58
VAMP3-203ENST00000487194 CHD3Q12873 2000 aaKnown RBP5.15□□□□□ -1.58
VAMP3-203ENST00000487194 IGHV3OR15-7A0A075B7D8 119 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 IGHV1-69-2A0A0G2JMI3 117 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 C9orf170A2RU37 121 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 A8MV72 311 aaPredicted RBP5.15□□□□□ -1.59
VAMP3-203ENST00000487194 TMEM178BH3BS89 294 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 SPINT2O43291 252 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 HSPA12AO43301 675 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 NDUFA2O43678 99 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 TUSC2O75896 110 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 SNAPC5O75971 98 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 SLC22A5O76082 557 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 SFT2D2O95562 160 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 FSTL3O95633 263 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 C1QBP02746 253 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 GIPP09681 153 aaPredicted RBP5.15□□□□□ -1.59
VAMP3-203ENST00000487194 HLA-GP17693 338 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 IGFBP2P18065 325 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 RCC1P18754 421 aaPredicted RBP5.15□□□□□ -1.59
VAMP3-203ENST00000487194 CXCL3P19876 107 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 AADACP22760 399 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 NFYAP23511 347 aaPredicted RBP5.15□□□□□ -1.59
VAMP3-203ENST00000487194 VAMP1P23763 118 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 S100GP29377 79 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 ERP29P30040 261 aaKnown RBP5.15□□□□□ -1.59
VAMP3-203ENST00000487194 IL2RGP31785 369 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 RBMXP38159 391 aaKnown RBP5.15□□□□□ -1.59
VAMP3-203ENST00000487194 FXYD4P59646 89 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 AESQ08117 197 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 CD300CQ08708 224 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 BAMBIQ13145 260 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 PPP1R1AQ13522 171 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 HERPUD1Q15011 391 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 HFEQ30201 348 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 ZNF788Q6ZQV5 615 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 SGPP2Q8IWX5 399 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 ZCCHC24Q8N2G6 241 aaKnown RBP5.15□□□□□ -1.59
VAMP3-203ENST00000487194 ZNF843Q8N446 348 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 UXS1Q8NBZ7 420 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 ADAD2Q8NCV1 583 aaKnown RBP5.15□□□□□ -1.59
VAMP3-203ENST00000487194 OR52B4Q8NGK2 314 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 COQ8AQ8NI60 647 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 FAM216AQ8WUB2 273 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 MITD1Q8WV92 249 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 NEU4Q8WWR8 484 aaPredicted RBP5.15□□□□□ -1.59
VAMP3-203ENST00000487194 CCL17Q92583 94 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 NINJ1Q92982 152 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 TOMM40LQ969M1 308 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 TMEM230Q96A57 120 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 GALMQ96C23 342 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 COQ2Q96H96 371 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 VRK1Q99986 396 aaPredicted RBP5.15□□□□□ -1.59
VAMP3-203ENST00000487194 RSRP1Q9BUV0 290 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 TMPRSS13Q9BYE2 586 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 SHARPINQ9H0F6 387 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 FXYD6Q9H0Q3 95 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 LIME1Q9H400 295 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 RANBP3Q9H6Z4 567 aaPredicted RBP5.15□□□□□ -1.59
VAMP3-203ENST00000487194 TAF9BQ9HBM6 251 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 DLL4Q9NR61 685 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 TMEM106BQ9NUM4 274 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 OR6C3Q9NZP0 311 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 KIF25Q9UIL4 384 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 METRNQ9UJH8 293 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 KCNIP3Q9Y2W7 256 aa5.15□□□□□ -1.59
VAMP3-203ENST00000487194 MAB21L2Q9Y586 359 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms