RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ZMPSTE24O75844 475 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 CCNKO75909 580 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 LCA5LO95447 670 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 C1GALT1C1LP0DN25 315 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 CD99P14209 185 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 COX6B1P14854 86 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 LOXP28300 417 aaPredicted RBP2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 OR2T5Q6IEZ7 315 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 RTL4Q6ZR62 310 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 NDUFAF7Q7L592 441 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 PID1Q7Z2X4 250 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 OR2W3Q7Z3T1 314 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 SETD3Q86TU7 594 aaPredicted RBP2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 TMEM256Q8N2U0 113 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 TRIML2Q8N7C3 387 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 ST6GALNAC3Q8NDV1 305 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 OR2T29Q8NH02 315 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 LINC01560Q8TB33 94 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 RXFP4Q8TDU9 374 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 CT55Q8WUE5 264 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 RSG1Q9BU20 258 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 REEP1Q9H902 201 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 TREM1Q9NP99 234 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 DDIT4Q9NX09 232 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 ZNF257Q9Y2Q1 563 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 SNX10Q9Y5X0 201 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 POLEQ07864 2286 aa2.92□□□□□ -1.94
PRPF38A-203ENST00000487160 FBN1P35555 2871 aaKnown RBP2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 IQCF5A8MTL0 148 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 C21orf140B9A014 251 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 CTNSO60931 367 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 APOA1P02647 267 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 GFAPP14136 432 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 OR2B8PP59922 312 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 PNOCQ13519 176 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 GPR176Q14439 515 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 RNASE13Q5GAN3 156 aaKnown RBP2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 FAM173BQ6P4H8 233 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 RBM45Q8IUH3 476 aaKnown RBP2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 DEFB106AQ8N104 65 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 SYS1Q8N2H4 156 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 ZNF645Q8N7E2 425 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 WDR31Q8NA23 367 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 NECAP1Q8NC96 275 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 C19orf18Q8NEA5 215 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 OR1J4Q8NGS1 313 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 LRRC20Q8TCA0 184 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 SLC37A2Q8TED4 501 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 ITLN2Q8WWU7 325 aaPredicted RBP2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 GHSRQ92847 366 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 RERGQ96A58 199 aaPredicted RBP2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 C18orf15Q96N68 181 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 SPIN2AQ99865 258 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 RNF5Q99942 180 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 SPIN2BQ9BPZ2 258 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 SPACA1Q9HBV2 294 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 FLVCR2Q9UPI3 526 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 GMEB1Q9Y692 573 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 ACANP16112 2415 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 ANKRD12Q6UB98 2062 aa2.91□□□□□ -1.94
PRPF38A-203ENST00000487160 SPTBP11277 2137 aa2.9□□□□□ -1.94
PRPF38A-203ENST00000487160 PVALEFA0A1B0GWK0 134 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 A0A1W2PRF3 423 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 A0A1W2PRM7 423 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 LRCOL1A6NCL2 159 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 CENPXA8MT69 81 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 C19orf84I3L1E1 186 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 CALUO43852 315 aaPredicted RBP2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 KLRC4O43908 158 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 HLA-DQB1P01920 261 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 PAEPP09466 180 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 CCNOP22674 350 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 GTF2H1P32780 548 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 ACTR1BP42025 376 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 KCNJ3P48549 501 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 UBE2E1P51965 193 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 PAFAH1B2P68402 229 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 GNA12Q03113 381 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 PPIDQ08752 370 aaKnown RBP2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 MOBPQ13875 183 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 VAMP3Q15836 100 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 PSG3Q16557 428 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 SHISA6Q6ZSJ9 500 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 MDP1Q86V88 176 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 TTLQ8NG68 377 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 OR10C1Q96KK4 312 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 UBE2E2Q96LR5 201 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 TEAD3Q99594 435 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 TOLLIPQ9H0E2 274 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 C1orf198Q9H425 327 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 RBFOX1Q9NWB1 397 aaKnown RBP2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 IFNKQ9P0W0 207 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 CES1P1Q9UKY3 287 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 NBEAL1Q6ZS30 2694 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 MXRA5Q9NR99 2828 aa2.9□□□□□ -1.95
PRPF38A-203ENST00000487160 FN1P02751 2386 aaKnown RBP2.89□□□□□ -1.95
PRPF38A-203ENST00000487160 CUBNO60494 3623 aa2.89□□□□□ -1.95
PRPF38A-203ENST00000487160 IGHV3-72A0A0B4J1Y9 119 aa2.89□□□□□ -1.95
PRPF38A-203ENST00000487160 A0A0B4J2E0 115 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms