RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 PRRC2CQ9Y520 2896 aaKnown RBP11.39□□□□□ -0.59
HMGN1-216ENST00000486741 hCG_38984A0A1B0GV85 526 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 GPR37O15354 613 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 RHBDL1O75783 438 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 C1QL1O75973 258 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 HAND1O96004 215 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 CELA3BP08861 270 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 PMELP40967 661 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 LHX2P50458 406 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 DHODHQ02127 395 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 Q8IYB0 196 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 OR1K1Q8NGR3 316 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 NGBQ9NPG2 151 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 TUBAL3A6NHL2 446 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 RNASEK-C17orf49H0YIS7 233 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 FCGR3BO75015 233 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 NDUFA6P56556 154 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 FGF12P61328 243 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 H3F3AP84243 136 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 BHLHA15Q7RTS1 189 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-216ENST00000486741 MOGAT3Q86VF5 341 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 BVESQ8NE79 360 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 OPN1MWP04001 364 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 OPN1MW2P0DN77 364 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 OPN1MW3P0DN78 364 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 MEOX2P50222 304 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 ZNF528Q3MIS6 628 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 FAM209BQ5JX69 171 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 C5orf24Q7Z6I8 188 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 CA5BP1Q8WTZ4 195 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 CCL17Q92583 94 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 PLEKHA3Q9HB20 300 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 ZNF581Q9P0T4 197 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 AMDHD2Q9Y303 409 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 ZP3P21754 424 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 G0S2P27469 103 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 ALDH3B1P43353 468 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 CLDN18P56856 261 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 SNRPEP62304 92 aaKnown RBP11.38□□□□□ -0.59
HMGN1-216ENST00000486741 VWA1Q6PCB0 445 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 HPSE2Q8WWQ2 592 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 V9GYS6 101 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 MSGN1A6NI15 193 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 OR5H1A6NKK0 313 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 PSG2P11465 335 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 ZNF708P17019 499 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 CLEC12BQ2HXU8 276 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 MPV17LQ2QL34 196 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 NABP1Q96AH0 204 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 SHARPINQ9H0F6 387 aa11.38□□□□□ -0.59
HMGN1-216ENST00000486741 USF3Q68DE3 2245 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 UBE2L5PA0A1B0GUS4 154 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 LRRC30A6NM36 301 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 MELTFP08582 738 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 RPS23P62266 143 aaKnown RBP11.37□□□□□ -0.59
HMGN1-216ENST00000486741 PJVKQ0ZLH3 352 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 ZNF154Q13106 437 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 RAB31Q13636 194 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 FN3KRPQ9HA64 309 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 A0A1W2PPE3 182 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 PPP1CCP36873 323 aaKnown RBP11.37□□□□□ -0.59
HMGN1-216ENST00000486741 TAGLN2P37802 199 aaKnown RBP11.37□□□□□ -0.59
HMGN1-216ENST00000486741 KLF3P57682 345 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-216ENST00000486741 C9orf152Q5JTZ5 239 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 BIVMQ86UB2 503 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 OR5B12Q96R08 314 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 HIPK2Q9H2X6 1198 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 RAB9BQ9NP90 201 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 SFTA3P0C7M3 94 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 CXorf66Q5JRM2 361 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-216ENST00000486741 PRDM14Q9GZV8 571 aa11.37□□□□□ -0.59
HMGN1-216ENST00000486741 EIF3GO75821 320 aaKnown RBP eCLIP11.36□□□□□ -0.59
HMGN1-216ENST00000486741 ZNF735P0CB33 412 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 ID4P47928 161 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 LHX4Q969G2 390 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 PNRC2Q9NPJ4 139 aaKnown RBP11.36□□□□□ -0.59
HMGN1-216ENST00000486741 C19orf12Q9NSK7 152 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 FOXD3Q9UJU5 478 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-216ENST00000486741 VDAC1P21796 283 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 RAB5CP51148 216 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 GUK1Q16774 197 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 LYG1Q8N1E2 194 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 OR10P1Q8NGE3 313 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 NIPSNAP3BQ9BS92 247 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 EGLN1Q9GZT9 426 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 CXXC4Q9H2H0 198 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 OR2W1Q9Y3N9 320 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 KIAA1549LQ6ZVL6 1849 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 ZNF705FA8MVS1 300 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-216ENST00000486741 LY86O95711 162 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 OR2H2O95918 312 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 ZNF705DP0CH99 300 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-216ENST00000486741 ZNF705BP0CI00 300 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-216ENST00000486741 TNFSF10P50591 281 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 DYNLT3P51808 116 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 FAM166AQ6J272 317 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 TMEM65Q6PI78 240 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 INO80CQ6PI98 192 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-216ENST00000486741 OR52M1Q8NGK5 317 aa11.36□□□□□ -0.59
HMGN1-216ENST00000486741 DLL3Q9NYJ7 618 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms