RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 TMEM104Q8NE00 496 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 WNT2BQ93097 391 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 LOC101059948A0A1B0GTJ6 334 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 A0A1W2PNV4 684 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 C3orf80F5H4A9 247 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 OPN1MWP04001 364 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 OPN1MW2P0DN77 364 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 OPN1MW3P0DN78 364 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 INO80CQ6PI98 192 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-228ENST00000486227 MDP1Q86V88 176 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 UHRF2Q96PU4 802 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 COMMD5Q9GZQ3 224 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 SMDT1Q9H4I9 107 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 GSN-AS1Q9NRJ2 163 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 DEFB108AA8MXU0 73 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 YIF1AO95070 293 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 GAPDHP04406 335 aaKnown RBP9.59□□□□□ -0.87
HDAC6-228ENST00000486227 CACNA1BQ00975 2339 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 TEX30Q5JUR7 227 aa9.59□□□□□ -0.87
HDAC6-228ENST00000486227 ADH4P08319 380 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 CD200P41217 278 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 RPL11P62913 178 aaKnown RBP9.58□□□□□ -0.88
HDAC6-228ENST00000486227 KLK13Q9UKR3 277 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 STARD10Q9Y365 291 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 CHCHD2Q9Y6H1 151 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-228ENST00000486227 OR5H1A6NKK0 313 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 LINC00587B1AMM8 73 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 B4DEV8 164 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 M0R143 59 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 CTSDP07339 412 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-228ENST00000486227 OR5AC1P0C628 307 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 BTNL3Q6UXE8 466 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 ZNF600Q6ZNG1 722 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 FAM214BQ7L5A3 538 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 OR2C3Q8N628 320 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 RGP1Q92546 391 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-228ENST00000486227 HIST1H2BAQ96A08 127 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 GNB4Q9HAV0 340 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 SERTAD4Q9NUC0 356 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 PTPRDP23468 1912 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 ADAM20O43506 726 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 FSTP19883 344 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 BCL3P20749 454 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 P2RY6Q15077 328 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 UBE2V2Q15819 145 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 TMEM255AQ5JRV8 349 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 SRXN1Q9BYN0 137 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 CXXC4Q9H2H0 198 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 NAA60Q9H7X0 242 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 PSENENQ9NZ42 101 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 AUP1Q9Y679 476 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 TSC2P49815 1807 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 A0A0U1RQV5 110 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 RFPL3SP0C7P2 107 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 FAM3AP98173 230 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 LINC00114Q6XXX2 140 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 MOB1BQ7L9L4 216 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 MOB3BQ86TA1 216 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 OR4F5Q8NH21 305 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 SLC25A40Q8TBP6 338 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 DYRK2Q92630 601 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 OR4F4Q96R69 305 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 SAP30LQ9HAJ7 183 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 KCNIP2Q9NS61 270 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 NLRC5Q86WI3 1866 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 INTS1Q8N201 2190 aaKnown RBP9.58□□□□□ -0.88
HDAC6-228ENST00000486227 ROS1P08922 2347 aa9.58□□□□□ -0.88
HDAC6-228ENST00000486227 TRBV5-7A0A0A0MS05 114 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 TRAV38-1A0A0B4J264 116 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 XKRY2A2RUG3 117 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 CDRT15L2A8MXV6 281 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 ACKR3P25106 362 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 OR3A1P47881 315 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 P2RY1P47900 373 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 COL19A1Q14993 1142 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 NFAM1Q8NET5 270 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-228ENST00000486227 OR10P1Q8NGE3 313 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 HDHD3Q9BSH5 251 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-228ENST00000486227 RTN4RQ9BZR6 473 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 TIMM8BQ9Y5J9 83 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-228ENST00000486227 M0R1X1 148 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 ASCL1P50553 236 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 MRPL14Q6P1L8 145 aaKnown RBP9.57□□□□□ -0.88
HDAC6-228ENST00000486227 MRGPRDQ8TDS7 321 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 ZNF586Q9NXT0 402 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 TRBV23-1A0A0A0MS06 115 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 IGHV3-43A0A0B4J1X8 118 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 TRAV39A0A0B4J263 110 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 H3BQ15 152 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 IGHV3-43DP0DP04 118 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 C17orf78Q8N4C9 275 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 TMEM37Q8WXS4 190 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 PINX1Q96BK5 328 aaKnown RBP9.57□□□□□ -0.88
HDAC6-228ENST00000486227 OR2J1Q9GZK6 312 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 NOTCH4Q99466 2003 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 IGLV3-12A0A075B6K2 115 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 MED19A0JLT2 244 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-228ENST00000486227 GPR37O15354 613 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 KCNAB3O43448 404 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 ONECUT2O95948 504 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms