RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 SPRY2O43597 315 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 EGR2P11161 476 aaPredicted RBP6.13□□□□□ -1.43
XRN1-212ENST00000486211 BNIP1Q12981 228 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 DYRK1AQ13627 763 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 ATXN7L3Q14CW9 347 aaPredicted RBP6.13□□□□□ -1.43
XRN1-212ENST00000486211 MMDQ15546 238 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 LRRC36Q1X8D7 754 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 RPL13AP3Q6NVV1 102 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 Q6P435 159 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 LINC00311Q8N616 119 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 RFESDQ8TAC1 157 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 RITA1Q96K30 269 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 ANKRD60Q9BZ19 345 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 COMMD4Q9H0A8 199 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 HMG20AQ9NP66 347 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 EXOSC4Q9NPD3 245 aaKnown RBP6.13□□□□□ -1.43
XRN1-212ENST00000486211 NUBP2Q9Y5Y2 271 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 LOC102724200A0A096LPH7 203 aaPredicted RBP6.12□□□□□ -1.43
XRN1-212ENST00000486211 DHRS7CA6NNS2 312 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 SLC33A1O00400 549 aaPredicted RBP6.12□□□□□ -1.43
XRN1-212ENST00000486211 SRSF10O75494 262 aaKnown RBP6.12□□□□□ -1.43
XRN1-212ENST00000486211 NPPAP01160 153 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 ALOX5APP20292 161 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 SSTR5P35346 364 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 ALDH3A2P51648 485 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 TPPP2P59282 170 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 NANOS2P60321 138 aaKnown RBP6.12□□□□□ -1.43
XRN1-212ENST00000486211 TRIM25Q14258 630 aaKnown RBP6.12□□□□□ -1.43
XRN1-212ENST00000486211 COQ5Q5HYK3 327 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 PYHIN1Q6K0P9 492 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 Q6ZWC4 215 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 TMEM217Q8N7C4 229 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 TCTEX1D1Q8N7M0 179 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 OR10A7Q8NGE5 316 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 OR51T1Q8NGJ9 327 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 RP9Q8TA86 221 aaKnown RBP6.12□□□□□ -1.43
XRN1-212ENST00000486211 GNPDA2Q8TDQ7 276 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 C2CD4CQ8TF44 421 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 MS4A10Q96PG2 267 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 NCOR1P1Q9H4R4 102 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 ZC4H2Q9NQZ6 224 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 KRT84Q9NSB2 600 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 CMTM6Q9NX76 183 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 KIF25Q9UIL4 384 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 GSTK1Q9Y2Q3 226 aa6.12□□□□□ -1.43
XRN1-212ENST00000486211 IGKV1-12A0A0C4DH73 117 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 ANKRD34BA5PLL1 514 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 MRASO14807 208 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 GADD45GO95257 159 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 IGKV1D-12P01611 117 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 KIR2DS2P43631 304 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 NUDT2P50583 147 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 FUT6P51993 359 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 ZNF137PP52743 207 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 VSNL1P62760 191 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 LSAMPQ13449 338 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 C5orf64Q2M2E5 130 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 DEFB135Q30KP9 77 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 CD200R1LQ6Q8B3 271 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 DEGS2Q6QHC5 323 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 RDH10Q8IZV5 341 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 C8orf31Q8N9H6 132 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 ZNF565Q8N9K5 539 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 STON2Q8WXE9 905 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 TSSK6Q9BXA6 273 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 CST11Q9H112 138 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 SLA2Q9H6Q3 261 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 CMC2Q9NRP2 79 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 CNOT2Q9NZN8 540 aaKnown RBP6.11□□□□□ -1.43
XRN1-212ENST00000486211 MYRFQ9Y2G1 1151 aa6.11□□□□□ -1.43
XRN1-212ENST00000486211 MEIKINA0A087WXM9 373 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 C16orf90A8MZG2 172 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 SLC31A2O15432 143 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 NBR2O15453 112 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 TXNL1O43396 289 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 OR2A4O95047 310 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 TRBV12-3P01733 135 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 ZNF44P15621 663 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 ZNF3P17036 446 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 CCL1P22362 96 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 C21orf33P30042 268 aaPredicted RBP6.1□□□□□ -1.43
XRN1-212ENST00000486211 IFNGR2P38484 337 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 HCCSP53701 268 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 SMIM11AP58511 58 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 KRTAP10-2P60368 255 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 ACTBP60709 375 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 ROM1Q03395 351 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 SF3A3Q12874 501 aaKnown RBP eCLIP6.1□□□□□ -1.43
XRN1-212ENST00000486211 DEFB114Q30KQ6 69 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 ZNF660Q6AZW8 331 aaPredicted RBP6.1□□□□□ -1.43
XRN1-212ENST00000486211 LIN54Q6MZP7 749 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 FAHD1Q6P587 224 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 RASSF6Q6ZTQ3 369 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 ELMOD2Q8IZ81 293 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 SYT8Q8NBV8 401 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 CHST4Q8NCG5 386 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 MRGPRDQ8TDS7 321 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 BTBD10Q9BSF8 475 aa6.1□□□□□ -1.43
XRN1-212ENST00000486211 INTS9Q9NV88 658 aaKnown RBP6.1□□□□□ -1.43
XRN1-212ENST00000486211 FBXL17Q9UF56 701 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms