RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 NDUFB8O95169 186 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 NDUFC2O95298 119 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 HPRT1P00492 218 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 OXTP01178 125 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 IGLV2-14P01704 120 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 ATP1B1P05026 303 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 ALPLP05186 524 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 OR5G3P0C626 314 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 GKN3PP0CG01 181 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 TNFRSF1BP20333 461 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 TSFMP43897 325 aaKnown RBP3.73□□□□□ -1.81
RTN4-213ENST00000485749 SLC18A1P54219 525 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 RPL26P61254 145 aaKnown RBP3.73□□□□□ -1.81
RTN4-213ENST00000485749 SEC61A1P61619 476 aaKnown RBP3.73□□□□□ -1.81
RTN4-213ENST00000485749 RPS28P62857 69 aaKnown RBP3.73□□□□□ -1.81
RTN4-213ENST00000485749 GNG5P63218 68 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 ZNF154Q13106 437 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 SLC10A1Q14973 349 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 EBPQ15125 230 aaKnown RBP3.73□□□□□ -1.81
RTN4-213ENST00000485749 SRSF7Q16629 238 aaKnown RBP eCLIP3.73□□□□□ -1.81
RTN4-213ENST00000485749 IAH1Q2TAA2 248 aaPredicted RBP3.73□□□□□ -1.81
RTN4-213ENST00000485749 ZNF684Q5T5D7 378 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 ZNF343Q6P1L6 599 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 SFXN4Q6P4A7 337 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 GOLT1AQ6ZVE7 132 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 TGIF2LYQ8IUE0 185 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 KLHDC8BQ8IXV7 354 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 TCTEX1D1Q8N7M0 179 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 OR2T12Q8NG77 320 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 OR5A2Q8NGI9 324 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 OR2G3Q8NGZ4 309 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 OLIG1Q8TAK6 271 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 ZFAND1Q8TCF1 268 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 GPR119Q8TDV5 335 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 PHLDA1Q8WV24 401 aaPredicted RBP3.73□□□□□ -1.81
RTN4-213ENST00000485749 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.73□□□□□ -1.81
RTN4-213ENST00000485749 PTX4Q96A99 478 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 TMEM159Q96B96 161 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 KCTD14Q9BQ13 255 aaPredicted RBP3.73□□□□□ -1.81
RTN4-213ENST00000485749 ZNF471Q9BX82 626 aaPredicted RBP3.73□□□□□ -1.81
RTN4-213ENST00000485749 PRSS22Q9GZN4 317 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 OR2D2Q9H210 308 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 PELI2Q9HAT8 420 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 HES4Q9HCC6 221 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 SAR1AQ9NR31 198 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 GLI3P10071 1580 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 ECM29Q5VYK3 1845 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 ARHGEF17Q96PE2 2063 aaPredicted RBP3.72□□□□□ -1.81
RTN4-213ENST00000485749 PLCH1Q4KWH8 1693 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 A0A087WX48 190 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 A0A0A6YYD4 124 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 A0A0G2JLM5 398 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 PNMA8CA0A1B0GUJ8 204 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 OR5H15A6NDH6 313 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 EEF1E1-BLOC1S5C9J1V9 151 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 D6RAR5 112 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 ZNF587BE7ETH6 402 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 EEF1E1O43324 174 aaKnown RBP3.72□□□□□ -1.81
RTN4-213ENST00000485749 TRAF3IP2O43734 574 aaPredicted RBP3.72□□□□□ -1.81
RTN4-213ENST00000485749 LYPD3O95274 346 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 IGHV2-5P01817 119 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 HBZP02008 142 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 TTRP02766 147 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 FABP3P05413 133 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 UCHL1P09936 223 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 GNB3P16520 340 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 ORM2P19652 201 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 AZU1P20160 251 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 EVI2AP22794 236 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 CDK2P24941 298 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 SAA4P35542 130 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 SOX3P41225 446 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 GABRA2P47869 451 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 REG1BP48304 166 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 RFX2P48378 723 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 GPM6AP51674 278 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 BACE1P56817 501 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 SLC35A1P78382 337 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 RUNX1Q01196 453 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 PLCXD2Q0VAA5 305 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 SHHQ15465 462 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 TRIP6Q15654 476 aaKnown RBP3.72□□□□□ -1.81
RTN4-213ENST00000485749 CCL15Q16663 113 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 TMEM52BQ4KMG9 183 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 TECRLQ5HYJ1 363 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 LDLRAD2Q5SZI1 272 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 ZNF620Q6ZNG0 422 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 ZNF788Q6ZQV5 615 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 MOB1BQ7L9L4 216 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 PRSS48Q7RTY5 328 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 ZNF571Q7Z3V5 609 aaPredicted RBP3.72□□□□□ -1.81
RTN4-213ENST00000485749 CEACAM19Q7Z692 300 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 UBALD2Q8IYN6 164 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 C11orf42Q8N5U0 333 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 RBMXL3Q8N7X1 1067 aaKnown RBP3.72□□□□□ -1.81
RTN4-213ENST00000485749 SLC35G3Q8N808 338 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 OR13A1Q8NGR1 328 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 OR51E1Q8TCB6 317 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 PCNPQ8WW12 178 aaKnown RBP3.72□□□□□ -1.81
RTN4-213ENST00000485749 OR5P3Q8WZ94 311 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms