RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 MPV17LQ2QL34 196 aa20.36■□□□□ 0.85
HLA-F-227ENST00000485513 ATAD3CQ5T2N8 411 aa20.36■□□□□ 0.85
HLA-F-227ENST00000485513 ZNF329Q86UD4 541 aa20.36■□□□□ 0.85
HLA-F-227ENST00000485513 HSD17B6O14756 317 aa20.35■□□□□ 0.85
HLA-F-227ENST00000485513 ZNF780AO75290 641 aaPredicted RBP20.35■□□□□ 0.85
HLA-F-227ENST00000485513 DUS4LO95620 317 aaKnown RBP20.35■□□□□ 0.85
HLA-F-227ENST00000485513 LALBAP00709 142 aa20.35■□□□□ 0.85
HLA-F-227ENST00000485513 SLC22A6Q4U2R8 563 aa20.35■□□□□ 0.85
HLA-F-227ENST00000485513 NEK7Q8TDX7 302 aa20.35■□□□□ 0.85
HLA-F-227ENST00000485513 CHPT1Q8WUD6 406 aa20.35■□□□□ 0.85
HLA-F-227ENST00000485513 GHSRQ92847 366 aa20.35■□□□□ 0.85
HLA-F-227ENST00000485513 ARL11Q969Q4 196 aa20.35■□□□□ 0.85
HLA-F-227ENST00000485513 ZNF184Q99676 751 aaPredicted RBP20.35■□□□□ 0.85
HLA-F-227ENST00000485513 CLEC2DQ9UHP7 191 aa20.35■□□□□ 0.85
HLA-F-227ENST00000485513 TRBV5-5A0A0J9YX44 114 aa20.34■□□□□ 0.85
HLA-F-227ENST00000485513 CCRL2O00421 344 aa20.34■□□□□ 0.85
HLA-F-227ENST00000485513 MPIG6BO95866 241 aa20.34■□□□□ 0.85
HLA-F-227ENST00000485513 GAPDHP04406 335 aaKnown RBP20.34■□□□□ 0.85
HLA-F-227ENST00000485513 GTF2F2P13984 249 aa20.34■□□□□ 0.85
HLA-F-227ENST00000485513 IGFBP3P17936 291 aaPredicted RBP20.34■□□□□ 0.85
HLA-F-227ENST00000485513 ZNF816Q0VGE8 651 aaPredicted RBP20.34■□□□□ 0.85
HLA-F-227ENST00000485513 OR52M1Q8NGK5 317 aa20.34■□□□□ 0.85
HLA-F-227ENST00000485513 NOL4LQ96MY1 436 aaPredicted RBP20.34■□□□□ 0.85
HLA-F-227ENST00000485513 CHCHD3Q9NX63 227 aaKnown RBP20.34■□□□□ 0.85
HLA-F-227ENST00000485513 CKLFQ9UBR5 152 aa20.34■□□□□ 0.85
HLA-F-227ENST00000485513 A0A1W2PP11 408 aa20.33■□□□□ 0.85
HLA-F-227ENST00000485513 SERPINE3A8MV23 424 aa20.33■□□□□ 0.85
HLA-F-227ENST00000485513 C15orf65H3BRN8 121 aa20.33■□□□□ 0.85
HLA-F-227ENST00000485513 EBAG9O00559 213 aa20.33■□□□□ 0.85
HLA-F-227ENST00000485513 SDCBPO00560 298 aaPredicted RBP20.33■□□□□ 0.85
HLA-F-227ENST00000485513 MED21Q13503 144 aa20.33■□□□□ 0.85
HLA-F-227ENST00000485513 DMKNQ6E0U4 476 aaPredicted RBP20.33■□□□□ 0.85
HLA-F-227ENST00000485513 MOB3BQ86TA1 216 aa20.33■□□□□ 0.85
HLA-F-227ENST00000485513 UBALD1Q8TB05 177 aa20.33■□□□□ 0.85
HLA-F-227ENST00000485513 CCDC107Q8WV48 283 aa20.33■□□□□ 0.85
HLA-F-227ENST00000485513 CYGBQ8WWM9 190 aa20.33■□□□□ 0.85
HLA-F-227ENST00000485513 TMEM80Q96HE8 168 aa20.33■□□□□ 0.85
HLA-F-227ENST00000485513 IGHV1-3A0A0C4DH29 117 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 GPX5O75715 221 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 REG1BP48304 166 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 RPL23AP62750 156 aaKnown RBP20.32■□□□□ 0.84
HLA-F-227ENST00000485513 EBI3Q14213 229 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 GPR176Q14439 515 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 Q499Y3 187 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 YIF1BQ5BJH7 314 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 TTC23Q5W5X9 447 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 ZNF497Q6ZNH5 498 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 SLC35E3Q7Z769 313 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 STX19Q8N4C7 294 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 LINC00311Q8N616 119 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 LINC00482Q8N8I6 264 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 ZFP41Q8N8Y5 198 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 OR51D1Q8NGF3 324 aa20.32■□□□□ 0.84
HLA-F-227ENST00000485513 TRAV8-7A0A075B6U6 113 aa20.31■□□□□ 0.84
HLA-F-227ENST00000485513 MAGEA13PA6NCF6 341 aa20.31■□□□□ 0.84
HLA-F-227ENST00000485513 ORC5O43913 435 aa20.31■□□□□ 0.84
HLA-F-227ENST00000485513 IGHG2P01859 326 aa20.31■□□□□ 0.84
HLA-F-227ENST00000485513 MT-ND4P03905 459 aa20.31■□□□□ 0.84
HLA-F-227ENST00000485513 RPS11P62280 158 aaKnown RBP eCLIP20.31■□□□□ 0.84
HLA-F-227ENST00000485513 C8orf31Q8N9H6 132 aa20.31■□□□□ 0.84
HLA-F-227ENST00000485513 SETD9Q8NE22 299 aa20.31■□□□□ 0.84
HLA-F-227ENST00000485513 GFOD1Q9NXC2 390 aa20.31■□□□□ 0.84
HLA-F-227ENST00000485513 LINC00527Q9UJ94 153 aa20.31■□□□□ 0.84
HLA-F-227ENST00000485513 IGHV3-72A0A0B4J1Y9 119 aa20.3■□□□□ 0.84
HLA-F-227ENST00000485513 K7EIL1 84 aa20.3■□□□□ 0.84
HLA-F-227ENST00000485513 AIPO00170 330 aa20.3■□□□□ 0.84
HLA-F-227ENST00000485513 FSTP19883 344 aa20.3■□□□□ 0.84
HLA-F-227ENST00000485513 SLC35B1P78383 322 aa20.3■□□□□ 0.84
HLA-F-227ENST00000485513 LRRC36Q1X8D7 754 aa20.3■□□□□ 0.84
HLA-F-227ENST00000485513 ETV3LQ6ZN32 361 aa20.3■□□□□ 0.84
HLA-F-227ENST00000485513 OR2W3Q7Z3T1 314 aa20.3■□□□□ 0.84
HLA-F-227ENST00000485513 FOXRED2Q8IWF2 684 aa20.3■□□□□ 0.84
HLA-F-227ENST00000485513 MRPL41Q8IXM3 137 aaKnown RBP20.3■□□□□ 0.84
HLA-F-227ENST00000485513 IZUMO1Q8IYV9 350 aa20.3■□□□□ 0.84
HLA-F-227ENST00000485513 EAF1Q96JC9 268 aaPredicted RBP20.3■□□□□ 0.84
HLA-F-227ENST00000485513 PGLYRP3Q96LB9 341 aa20.3■□□□□ 0.84
HLA-F-227ENST00000485513 SPACA1Q9HBV2 294 aa20.3■□□□□ 0.84
HLA-F-227ENST00000485513 MRPS28Q9Y2Q9 187 aaKnown RBP20.3■□□□□ 0.84
HLA-F-227ENST00000485513 IGHV3-43A0A0B4J1X8 118 aa20.29■□□□□ 0.84
HLA-F-227ENST00000485513 IGHV3-43DP0DP04 118 aa20.29■□□□□ 0.84
HLA-F-227ENST00000485513 IL3RAP26951 378 aa20.29■□□□□ 0.84
HLA-F-227ENST00000485513 FAM53AQ6NSI3 398 aaPredicted RBP20.29■□□□□ 0.84
HLA-F-227ENST00000485513 JAGN1Q8N5M9 183 aa20.29■□□□□ 0.84
HLA-F-227ENST00000485513 COMMD1Q8N668 190 aa20.29■□□□□ 0.84
HLA-F-227ENST00000485513 ZNF485Q8NCK3 441 aa20.29■□□□□ 0.84
HLA-F-227ENST00000485513 MUL1Q969V5 352 aa20.29■□□□□ 0.84
HLA-F-227ENST00000485513 ZFP57Q9NU63 452 aa20.29■□□□□ 0.84
HLA-F-227ENST00000485513 TRBV5-7A0A0A0MS05 114 aa20.28■□□□□ 0.84
HLA-F-227ENST00000485513 NCBP2LA6PVI3 153 aaKnown RBP20.28■□□□□ 0.84
HLA-F-227ENST00000485513 NUDT19A8MXV4 375 aa20.28■□□□□ 0.84
HLA-F-227ENST00000485513 MCRIP1C9JLW8 97 aa20.28■□□□□ 0.84
HLA-F-227ENST00000485513 THBS3P49746 956 aa20.28■□□□□ 0.84
HLA-F-227ENST00000485513 KRTAP10-11P60412 298 aa20.28■□□□□ 0.84
HLA-F-227ENST00000485513 GLIPR1L1Q6UWM5 242 aa20.28■□□□□ 0.84
HLA-F-227ENST00000485513 TGIF2LXQ8IUE1 241 aa20.28■□□□□ 0.84
HLA-F-227ENST00000485513 STPG2Q8N412 459 aa20.28■□□□□ 0.84
HLA-F-227ENST00000485513 Q8N6K4 173 aa20.28■□□□□ 0.84
HLA-F-227ENST00000485513 OR2T10Q8NGZ9 312 aa20.28■□□□□ 0.84
HLA-F-227ENST00000485513 RTN4IP1Q8WWV3 396 aaPredicted RBP20.28■□□□□ 0.84
HLA-F-227ENST00000485513 GGHQ92820 318 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 607.3 ms