RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 LSAMPQ13449 338 aa14.47□□□□□ -0.09
CHMP3-207ENST00000485465 RNASE12Q5GAN4 147 aaKnown RBP14.47□□□□□ -0.09
CHMP3-207ENST00000485465 CYB5R2Q6BCY4 276 aa14.47□□□□□ -0.09
CHMP3-207ENST00000485465 TRAT1Q6PIZ9 186 aa14.47□□□□□ -0.09
CHMP3-207ENST00000485465 GVQW1Q8N7I0 195 aa14.47□□□□□ -0.09
CHMP3-207ENST00000485465 MAFIPQ8WZ33 124 aa14.47□□□□□ -0.09
CHMP3-207ENST00000485465 COX4I2Q96KJ9 171 aa14.47□□□□□ -0.09
CHMP3-207ENST00000485465 ZNF714Q96N38 554 aa14.47□□□□□ -0.09
CHMP3-207ENST00000485465 SRRQ9GZT4 340 aa14.47□□□□□ -0.09
CHMP3-207ENST00000485465 KCNIP1Q9NZI2 227 aa14.47□□□□□ -0.09
CHMP3-207ENST00000485465 OPN4Q9UHM6 478 aa14.47□□□□□ -0.09
CHMP3-207ENST00000485465 SETXQ7Z333 2677 aaKnown RBP14.47□□□□□ -0.09
CHMP3-207ENST00000485465 KBTBD11-OT1A0A1B0GTJ5 212 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 ZNF729A6NN14 1252 aaPredicted RBP14.46□□□□□ -0.09
CHMP3-207ENST00000485465 C12orf77C9JDV5 145 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 GSTZ1O43708 216 aaPredicted RBP14.46□□□□□ -0.09
CHMP3-207ENST00000485465 ORC5O43913 435 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 ZNF728P0DKX0 622 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 DLX6P56179 175 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 HMGN3Q15651 99 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 C17orf58Q2M2W7 97 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 BTNL3Q6UXE8 466 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 Q6ZS49 121 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 ZNF554Q86TJ5 538 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 HOGA1Q86XE5 327 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 SMIM4Q8WVI0 70 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 TMEM186Q96B77 213 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 GAL3ST2Q9H3Q3 398 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 TAF9BQ9HBM6 251 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 IFT46Q9NQC8 304 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 CALYQ9NYX4 217 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 ONECUT1Q9UBC0 465 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 ANAPC10Q9UM13 185 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 INSIG2Q9Y5U4 225 aa14.46□□□□□ -0.09
CHMP3-207ENST00000485465 CR1P17927 2039 aa14.46□□□□□ -0.1
CHMP3-207ENST00000485465 TRDCB7Z8K6 153 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 C15orf65H3BRN8 121 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 RBBP9O75884 186 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 TGFAP01135 160 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 INHBBP09529 407 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 SSTR5P35346 364 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 DVL1P1P54792 670 aaPredicted RBP14.45□□□□□ -0.1
CHMP3-207ENST00000485465 ARF6P62330 175 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 HLA-DRB3P79483 266 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 C5orf24Q7Z6I8 188 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 KIR3DL3Q8N743 410 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 GDPD1Q8N9F7 314 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 ARL11Q969Q4 196 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 LINC00574Q9H8X3 128 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 ZNF286AQ9HBT8 521 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 HIF1ANQ9NWT6 349 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 MTFP1Q9UDX5 166 aa14.45□□□□□ -0.1
CHMP3-207ENST00000485465 OTOGQ6ZRI0 2925 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 IGKV1D-8A0A087WSZ0 117 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 C17orf98A8MV24 154 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 NPIPB11E5RHQ5 1161 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 M0R1W7 72 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 SPINT2O43291 252 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 HBZP02008 142 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 FCER2P06734 321 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 NAT1P18440 290 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 KIR2DS4P43632 304 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 PAX8Q06710 450 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 ZNF846Q147U1 533 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 KIR2DS1Q14954 304 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 DCAF12L2Q5VW00 463 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 GLCCI1Q86VQ1 547 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 Q8N402 240 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 C11orf42Q8N5U0 333 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 BEST4Q8NFU0 473 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 OR1L1Q8NH94 360 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 RFESDQ8TAC1 157 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 UBALD1Q8TB05 177 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 SDHCQ99643 169 aaPredicted RBP14.44□□□□□ -0.1
CHMP3-207ENST00000485465 WDR12Q9GZL7 423 aaKnown RBP14.44□□□□□ -0.1
CHMP3-207ENST00000485465 RAB9BQ9NP90 201 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 KLK11Q9UBX7 282 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 KPTNQ9Y664 436 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 ITPR3Q14573 2671 aa14.44□□□□□ -0.1
CHMP3-207ENST00000485465 FABP7O15540 132 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 RBP4P02753 201 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 SCTP09683 121 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 GSTT2P0CG29 244 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 GSTT2BP0CG30 244 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 ZNF16P17020 682 aaPredicted RBP14.43□□□□□ -0.1
CHMP3-207ENST00000485465 GATA3P23771 443 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 RCVRNP35243 200 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 ERVFRD-1P60508 538 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 SSBP1Q04837 148 aaKnown RBP14.43□□□□□ -0.1
CHMP3-207ENST00000485465 C1orf122Q6ZSJ8 110 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 PRR18Q8N4B5 295 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 Q8N7P7 452 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 SNAPC3Q92966 411 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 C18orf12Q96KH6 178 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 THAP7Q9BT49 309 aaPredicted RBP14.43□□□□□ -0.1
CHMP3-207ENST00000485465 IDI2-AS1Q9NZ38 188 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 ANXA10Q9UJ72 324 aa14.43□□□□□ -0.1
CHMP3-207ENST00000485465 RBMX2Q9Y388 322 aaKnown RBP14.43□□□□□ -0.1
CHMP3-207ENST00000485465 MYO9AB2RTY4 2548 aa14.42□□□□□ -0.1
CHMP3-207ENST00000485465 DOCK11Q5JSL3 2073 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms