RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 KIR2DS4P43632 304 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 PDLIM4P50479 330 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 ATP5J2P56134 94 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 TAS2R46P59540 309 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 SEC61A1P61619 476 aaKnown RBP6.82□□□□□ -1.32
USP4-210ENST00000483212 MEF2DQ14814 521 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 KIR2DS1Q14954 304 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 CDK10Q15131 360 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 RNASE10Q5GAN6 216 aaKnown RBP6.82□□□□□ -1.32
USP4-210ENST00000483212 ZNF554Q86TJ5 538 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 LHFPL1Q86WI0 220 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 CENPSQ8N2Z9 138 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 SPICQ8N5J4 248 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 DUSP18Q8NEJ0 188 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 OR4A4PQ8NGN8 299 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 OR13C8Q8NGS7 320 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 OR5H2Q8NGV7 314 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 C10orf105Q8TEF2 133 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 CORO2AQ92828 525 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 MBD6Q96DN6 1003 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 TIMD4Q96H15 378 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 LURAP1Q96LR2 239 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 BPESC1Q9GZL8 116 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 LINC00574Q9H8X3 128 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 PATZ1Q9HBE1 687 aaKnown RBP6.82□□□□□ -1.32
USP4-210ENST00000483212 C19orf12Q9NSK7 152 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 BEX4Q9NWD9 120 aaPredicted RBP6.82□□□□□ -1.32
USP4-210ENST00000483212 ING3Q9NXR8 418 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 TRAPPC2LQ9UL33 140 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 UNC79Q9P2D8 2635 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 FASNP49327 2511 aaKnown RBP6.82□□□□□ -1.32
USP4-210ENST00000483212 ABCA12Q86UK0 2595 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 TRBV6-7A0A0A0MS04 114 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 NDUFS8O00217 210 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 NDUFB3O43676 98 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 TUSC2O75896 110 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 NDUFB6O95139 128 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 DIRAS3O95661 229 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 IGHV2-5P01817 119 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 AMY2AP04746 511 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 RPS2P15880 293 aaKnown RBP6.81□□□□□ -1.32
USP4-210ENST00000483212 SSTR5P35346 364 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 FAUP35544 74 aaKnown RBP6.81□□□□□ -1.32
USP4-210ENST00000483212 CCR6P51684 374 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 EDDM3BP56851 147 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 LMO4P61968 165 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 MEF2CQ06413 473 aaPredicted RBP6.81□□□□□ -1.32
USP4-210ENST00000483212 ZNF273Q14593 569 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 CARTPTQ16568 116 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 C17orf58Q2M2W7 97 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 CHRFAM7AQ494W8 412 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 LRRC10Q5BKY1 277 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 IGSF11Q5DX21 431 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 AADACL3Q5VUY0 350 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 WDR25Q64LD2 544 aaPredicted RBP6.81□□□□□ -1.32
USP4-210ENST00000483212 MZT2BQ6NZ67 158 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 DHRS11Q6UWP2 260 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 Q6ZNX1 250 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 LRRC75A-AS1Q8N1F1 130 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 ARRDC1Q8N5I2 433 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 MINDY2Q8NBR6 621 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 OR51S1Q8NGJ8 323 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 OR1L1Q8NH94 360 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 CLDND2Q8NHS1 167 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 MRGPRDQ8TDS7 321 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 UPRTQ96BW1 309 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 NEIL1Q96FI4 390 aaPredicted RBP6.81□□□□□ -1.32
USP4-210ENST00000483212 PERPQ96FX8 193 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 TOLLIPQ9H0E2 274 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 TAF9BQ9HBM6 251 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 NECAP2Q9NVZ3 263 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 EHFQ9NZC4 300 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 MIOXQ9UGB7 285 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 OPN4Q9UHM6 478 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 MGAT4AQ9UM21 535 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 POLQO75417 2590 aa6.81□□□□□ -1.32
USP4-210ENST00000483212 SPG11Q96JI7 2443 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 IGHV4-30-2A0A087WSY4 118 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 A0A096LNT2 108 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 MEX3AA1L020 520 aaKnown RBP6.8□□□□□ -1.32
USP4-210ENST00000483212 FUOMA2VDF0 154 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 OR5H14A6NHG9 310 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 CENPXA8MT69 81 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 KIAA1324LA8MWY0 1029 aaPredicted RBP6.8□□□□□ -1.32
USP4-210ENST00000483212 DISC1C4P0D8 188 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 F2RL2O00254 374 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 SDCBPO00560 298 aaPredicted RBP6.8□□□□□ -1.32
USP4-210ENST00000483212 HBZP02008 142 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 TCRBP04435 133 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 HEXAP06865 529 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 OR5H8P0DN80 308 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 NDUFB7P17568 137 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 GZMHP20718 246 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 GLP1RP43220 463 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 OR3A3P47888 321 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 DLX6P56179 175 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 ARPC4P59998 168 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 DEFB113Q30KQ7 82 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 C6orf183Q5T699 404 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 TMEM200BQ69YZ2 307 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms