RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 TUSC2O75896 110 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 CST7O76096 145 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 SULT1A1P50225 295 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 FGF12P61328 243 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 RND3P61587 244 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 EIF2S3LQ2VIR3 472 aaKnown RBP12.7□□□□□ -0.38
ATG4B-220ENST00000482507 NMSQ5H8A3 153 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 TUSC5Q8IXB3 177 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 FAM185AQ8N0U4 392 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 FAM24BQ8N5W8 94 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 TUBA4BQ9H853 241 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 LYRM2Q9NU23 88 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-220ENST00000482507 DOCK10Q96BY6 2186 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 TNFSF12O43508 249 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 LILRA1O75019 489 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 PITX3O75364 302 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 TK1P04183 234 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 SERPINA7P05543 415 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 IGFBP7Q16270 282 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 ZNF488Q96MN9 340 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 ZNF552Q9H707 407 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-220ENST00000482507 KCNJ16Q9NPI9 418 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 IGKV3D-15A0A087WSY6 115 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A10PA6NDY2 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A18PA6NE21 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A16PA6NEW6 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A20PA6NIJ5 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A8PA6NJQ4 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A7PA6NKC0 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A22PA8MWA6 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A12PA8MX19 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A5PA8MXJ8 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A23PA8MXZ1 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 ZNF732B4DXR9 585 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A15PP0C7V4 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A13PP0C7W8 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A14PP0C7W9 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 FAM90A24PP0C7X0 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 RAB5AP20339 215 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 LHX2P50458 406 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 SRPXP78539 464 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 RUNX1Q01196 453 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 CEACAM21Q3KPI0 293 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 SP5Q6BEB4 398 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-220ENST00000482507 IGF2-ASQ6U949 168 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 ZNF565Q8N9K5 539 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 OR5C1Q8NGR4 320 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 PLEKHF2Q9H8W4 249 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 MRPS18CQ9Y3D5 142 aaKnown RBP12.69□□□□□ -0.38
ATG4B-220ENST00000482507 PRRC2CQ9Y520 2896 aaKnown RBP12.69□□□□□ -0.38
ATG4B-220ENST00000482507 ZNF407Q9C0G0 2248 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 A0A0G2JRQ6 117 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 A0A1B0GW64 132 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 UBE2CO00762 179 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 UCP1P25874 307 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 DYNLT3P51808 116 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 LINC00696Q6ZRV3 163 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 TMEM217Q8N7C4 229 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 CALHM2Q9HA72 323 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 PLA2G3Q9NZ20 509 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 WASF3Q9UPY6 502 aa12.69□□□□□ -0.38
ATG4B-220ENST00000482507 IGF2RP11717 2491 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 URB1O60287 2271 aaKnown RBP12.68□□□□□ -0.38
ATG4B-220ENST00000482507 CLEC18AA5D8T8 446 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 KLK10O43240 276 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 PAX9P55771 341 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 CLDN18P56856 261 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 B2MP61769 119 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 ID3Q02535 119 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 HAGHQ16775 308 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 NRN1LQ496H8 165 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 PCSK4Q6UW60 755 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 SLC16A13Q7RTY0 426 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 ZDHHC23Q8IYP9 409 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 ZNF561Q8N587 486 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 CLEC18CQ8NCF0 446 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 PBDC1Q9BVG4 233 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 IFT22Q9H7X7 185 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 TAAR3PQ9P1P4 343 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 LRFN1Q9P244 771 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 PUS1Q9Y606 427 aaKnown RBP eCLIP12.68□□□□□ -0.38
ATG4B-220ENST00000482507 SS18L1O75177 396 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-220ENST00000482507 NEURL1O76050 574 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 ZNF154Q13106 437 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 ZNF266Q14584 549 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 SRSF7Q16629 238 aaKnown RBP eCLIP12.68□□□□□ -0.388e-7■□□□□ 11.3
ATG4B-220ENST00000482507 MRPL21Q7Z2W9 205 aaKnown RBP12.68□□□□□ -0.38
ATG4B-220ENST00000482507 ZNF295-AS1Q8N0V1 137 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 OR1J1Q8NGS3 322 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 NEK7Q8TDX7 302 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 POM121Q96HA1 1249 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 YPEL4Q96NS1 127 aa12.68□□□□□ -0.38
ATG4B-220ENST00000482507 RBFOX3A6NFN3 312 aa12.67□□□□□ -0.38
ATG4B-220ENST00000482507 CHST1O43916 411 aa12.67□□□□□ -0.38
ATG4B-220ENST00000482507 FBP1P09467 338 aa12.67□□□□□ -0.38
ATG4B-220ENST00000482507 RPS23P62266 143 aaKnown RBP12.67□□□□□ -0.38
ATG4B-220ENST00000482507 RHEBQ15382 184 aa12.67□□□□□ -0.38
ATG4B-220ENST00000482507 SAXO1Q8IYX7 474 aa12.67□□□□□ -0.38
ATG4B-220ENST00000482507 NANPQ8TBE9 248 aa12.67□□□□□ -0.38
ATG4B-220ENST00000482507 MRPL30Q8TCC3 161 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms