RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 SLC29A1Q99808 456 aa2.34□□□□□ -2.03
CBX3-207ENST00000481300 CIB1Q99828 191 aa2.34□□□□□ -2.03
CBX3-207ENST00000481300 C9orf16Q9BUW7 83 aa2.34□□□□□ -2.03
CBX3-207ENST00000481300 RSPO3Q9BXY4 272 aaPredicted RBP2.34□□□□□ -2.03
CBX3-207ENST00000481300 TBL1XR1Q9BZK7 514 aa2.34□□□□□ -2.03
CBX3-207ENST00000481300 REEP1Q9H902 201 aa2.34□□□□□ -2.03
CBX3-207ENST00000481300 NMNAT1Q9HAN9 279 aaPredicted RBP2.34□□□□□ -2.03
CBX3-207ENST00000481300 NTN4Q9HB63 628 aa2.34□□□□□ -2.03
CBX3-207ENST00000481300 TMEM27Q9HBJ8 222 aa2.34□□□□□ -2.03
CBX3-207ENST00000481300 ZNF160Q9HCG1 818 aa2.34□□□□□ -2.03
CBX3-207ENST00000481300 ISYNA1Q9NPH2 558 aa2.34□□□□□ -2.03
CBX3-207ENST00000481300 KCNJ16Q9NPI9 418 aa2.34□□□□□ -2.03
CBX3-207ENST00000481300 C8orf4Q9NR00 106 aa2.34□□□□□ -2.03
CBX3-207ENST00000481300 UBQLN4Q9NRR5 601 aa2.34□□□□□ -2.03
CBX3-207ENST00000481300 SAMHD1Q9Y3Z3 626 aaKnown RBP2.34□□□□□ -2.03
CBX3-207ENST00000481300 MRPS18BQ9Y676 258 aaKnown RBP2.34□□□□□ -2.03
CBX3-207ENST00000481300 DSPPQ9NZW4 1301 aa2.34□□□□□ -2.04
CBX3-207ENST00000481300 ZFHX2Q9C0A1 2572 aaPredicted RBP2.34□□□□□ -2.04
CBX3-207ENST00000481300 KNL1Q8NG31 2342 aa2.34□□□□□ -2.04
CBX3-207ENST00000481300 TRPM6Q9BX84 2022 aa2.34□□□□□ -2.04
CBX3-207ENST00000481300 MYO10Q9HD67 2058 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 NCOR1O75376 2440 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 TRIOO75962 3097 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 SDK1Q7Z5N4 2213 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 IGLV4-60A0A075B6I1 120 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 ZNF816-ZNF321PA0A0X1KG74 233 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 TRAPPC13A5PLN9 417 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 OR6C70A6NIJ9 312 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 CPSF4LA6NMK7 179 aaKnown RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 ZNF716A6NP11 495 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 H0YJX3 145 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 FAAHO00519 579 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 TP53I11O14683 189 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 FFAR1O14842 300 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 RAB29O14966 203 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 MRPS12O15235 138 aaKnown RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 RNF13O43567 381 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 FADS1O60427 444 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 EIF4E2O60573 245 aaKnown RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 UGT2B11O75310 529 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 OR2J2O76002 312 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 CCNB2O95067 398 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 OR5F1O95221 314 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 GADD45GO95257 159 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 EPPINO95925 133 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 CSTAP01040 98 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 GNAO1P09471 354 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 ZNF735P0CB33 412 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 UBTFL6P0CB48 400 aaPredicted RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 LIPCP11150 499 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 ZNF823P16415 610 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 RRM2P31350 389 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 MAS1LP35410 378 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 CEACAM6P40199 344 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 NAA10P41227 235 aaPredicted RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 HSPA13P48723 471 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 TMED10P49755 219 aaKnown RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 MLF1P58340 268 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 TAS2R41P59536 307 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 COPZ1P61923 177 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 RAP1AP62834 184 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 ADARB1P78563 741 aaKnown RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 DGCR6Q14129 220 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 TRAM2Q15035 370 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 OR1Q1Q15612 314 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 POU2AF1Q16633 256 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 THEM4Q5T1C6 240 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 MRPL2Q5T653 305 aaKnown RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 FAHD1Q6P587 224 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 TBPL2Q6SJ96 375 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 OPN5Q6U736 354 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 IGFL3Q6UXB1 125 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 ZNF550Q7Z398 422 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 MARCH3Q86UD3 253 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 RPS19BP1Q86WX3 136 aaKnown RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 HS3ST5Q8IZT8 346 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 TMEM156Q8N614 296 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 GATSQ8NAP1 163 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 OR10G2Q8NGC3 310 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 OR4K5Q8NGD3 323 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 PIGXQ8TBF5 258 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 PHF10Q8WUB8 498 aaKnown RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 CYGBQ8WWM9 190 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 DNAJC9Q8WXX5 260 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 HGDQ93099 445 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 SLC38A4Q969I6 547 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 SLC35B4Q969S0 331 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 CREB3L1Q96BA8 519 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 NRBF2Q96F24 287 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 PRRC1Q96M27 445 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 WFIKKN1Q96NZ8 548 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 WFDC6Q9BQY6 131 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 NDFIP1Q9BT67 221 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 SLC25A2Q9BXI2 301 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 UCK2Q9BZX2 261 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 PARP12Q9H0J9 701 aaKnown RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 Q9H521 79 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 FGF20Q9NP95 211 aaPredicted RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 ASCL3Q9NQ33 180 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 ACER3Q9NUN7 267 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms