RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	CLLU1OS	Q5K130	101 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	OGFRL1	Q5TC84	451 aa	Predicted RBP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	FAM151B	Q6UXP7	276 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	MTERF4	Q7Z6M4	381 aa	Known RBP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	ZCCHC24	Q8N2G6	241 aa	Known RBP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	SLC25A45	Q8N413	288 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	OR2M7	Q8NG81	312 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	OR52E4	Q8NGH9	312 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	OR5K1	Q8NHB7	308 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	STOML3	Q8TAV4	291 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	FAM57A	Q8TBR7	257 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	DYNC2LI1	Q8TCX1	351 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	DDI1	Q8WTU0	396 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	OTUB2	Q96DC9	234 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	PYURF	Q96I23	114 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	ARL5B	Q96KC2	179 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	OLFM3	Q96PB7	478 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	DERL3	Q96Q80	235 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	SPACA5	Q96QH8	159 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	TMEM208	Q9BTX3	173 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	BBS2	Q9BXC9	721 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	EIF5A2	Q9GZV4	153 aa	Known RBP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	OR51B6	Q9H340	312 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	POMK	Q9H5K3	350 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	ASB7	Q9H672	318 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	PLEKHF2	Q9H8W4	249 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	DDIT4	Q9NX09	232 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	MS4A12	Q9NXJ0	267 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	TMEM216	Q9P0N5	145 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	CYB5R1	Q9UHQ9	305 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	GLS2	Q9UI32	602 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	FBXL3	Q9UKT7	428 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	POFUT2	Q9Y2G5	429 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	C15orf41	Q9Y2V0	281 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	KLF13	Q9Y2Y9	288 aa	Predicted RBP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	FIS1	Q9Y3D6	152 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	PUS1	Q9Y606	427 aa	Known RBP eCLIP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	TMEM94	Q12767	1356 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	VWA8	A3KMH1	1905 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	SSH2	Q76I76	1423 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	IGHV3-21	A0A0B4J1V1	117 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	IGHV2-26	A0A0B4J1V2	119 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	CCL15-CCL14	A0A0B4J2E2	113 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173		A0A1B0GX12	115 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	IZUMO1R	A6ND01	250 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173		B4DEV8	164 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	FTCDNL1	E5RQL4	147 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173		F5H5P2	479 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	GOLGA6L19	H0YKK7	550 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	MKRN2OS	H3BPM6	223 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173		M0QXV9	152 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173		M0QYV0	167 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	CCRL2	O00421	344 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	ITGB1BP1	O14713	200 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	CDIPT	O14735	213 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	SLC31A1	O15431	190 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	GYG2	O15488	501 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	TCF21	O43680	179 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	SYNGR2	O43760	224 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	HPGDS	O60760	199 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	SHOX2	O60902	331 aa	Predicted RBP	0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	DEXI	O95424	95 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	CA2	P00918	260 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	OXT	P01178	125 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	IGHG2	P01859	326 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	HLA-A	P01891	365 aa	Known RBP	0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	GYPC	P04921	128 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	SEC11B	P0C7V7	166 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	GTF2F2	P13984	249 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	PSMA1	P25786	263 aa	Known RBP	0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	CRABP2	P29373	138 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	TSPO	P30536	169 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	AGTR1	P30556	359 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	CD79B	P40259	229 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	MAGEA6	P43360	314 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	SULT1A2	P50226	295 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	STC1	P52823	247 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	CEBPG	P53567	150 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	GABARAPL2	P60520	117 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	DAD1	P61803	113 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	ENDOG	Q14249	297 aa	Known RBP	0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	BCL2A1	Q16548	175 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	CCL15	Q16663	113 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	KRTAP25-1	Q3LHN0	102 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	ZNF678	Q5SXM1	525 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	CCDC122	Q5T0U0	273 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	FAM162B	Q5T6X4	162 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	HENMT1	Q5T8I9	393 aa	Known RBP	0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	TMEM215	Q68D42	235 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	KDM4D	Q6B0I6	523 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	PTRHD1	Q6GMV3	140 aa	Known RBP	0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	NIPAL1	Q6NVV3	410 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	SCGB1D4	Q6XE38	83 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173		Q6ZT83	130 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	TPGS1	Q6ZTW0	290 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	LYZL2	Q7Z4W2	148 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	FAM19A1	Q7Z5A9	133 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	TMEM144	Q7Z5S9	345 aa		0.81	□□□□□ -2.28
CCNL1-223	ENST00000481173	DPPA2	Q7Z7J5	298 aa		0.81	□□□□□ -2.28

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms