RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 SLC7A9P82251 487 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 SRSF7Q16629 238 aaKnown RBP eCLIP6.22□□□□□ -1.41
LSM5-210ENST00000480956 C9orf66Q5T8R8 295 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 N4BP2L1Q5TBK1 243 aaPredicted RBP6.22□□□□□ -1.41
LSM5-210ENST00000480956 KDM4DQ6B0I6 523 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 FAM53AQ6NSI3 398 aaPredicted RBP6.22□□□□□ -1.41
LSM5-210ENST00000480956 TMEM252Q8N6L7 170 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 SKA2Q8WVK7 121 aaPredicted RBP6.22□□□□□ -1.41
LSM5-210ENST00000480956 NEUROG1Q92886 237 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 ZNF524Q96C55 264 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 OR52E6Q96RD3 313 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 MARVELD1Q9BSK0 173 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 ABCG5Q9H222 651 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 SPANXA1Q9NS26 97 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 PCYOX1Q9UHG3 505 aa6.22□□□□□ -1.41
LSM5-210ENST00000480956 NRCAMQ92823 1304 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 CIB4A0PJX0 185 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 D6RAR5 112 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 OR4A8P0C604 315 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 RAB3AP20336 220 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 SLC18A1P54219 525 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 HERPUD1Q15011 391 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 BATFQ16520 125 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 ZNF506Q5JVG8 444 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 GSG1LQ6UXU4 331 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 TGIF2LYQ8IUE0 185 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 UBL4BQ8N7F7 174 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 OR9I1Q8NGQ6 314 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 SMIM8Q96KF7 97 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 PFDN5Q99471 154 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 C1QTNF4Q9BXJ3 329 aa6.21□□□□□ -1.42
LSM5-210ENST00000480956 POLR2J2Q9GZM3 115 aaKnown RBP6.21□□□□□ -1.42
LSM5-210ENST00000480956 POLR2J3Q9H1A7 115 aaKnown RBP6.21□□□□□ -1.42
LSM5-210ENST00000480956 SLIT3O75094 1523 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 CDK12Q9NYV4 1490 aaPredicted RBP6.2□□□□□ -1.42
LSM5-210ENST00000480956 SMIM26A0A096LP01 95 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 IGHV1-69DA0A0B4J2H0 117 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 PRORSD1PA6NEY8 169 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 EEF1E1-BLOC1S5C9J1V9 151 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 C8orf87E5RJ46 101 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 PSPHP1O15172 72 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 EEF1E1O43324 174 aaKnown RBP6.2□□□□□ -1.42
LSM5-210ENST00000480956 PDE6DO43924 150 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 CCNKO75909 580 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 GPR75O95800 540 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 RGNQ15493 299 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 ZNF585BQ52M93 769 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 C19orf48Q6RUI8 117 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 PAMR1Q6UXH9 720 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 ZNF589Q86UQ0 364 aaPredicted RBP6.2□□□□□ -1.42
LSM5-210ENST00000480956 CSNK1G2-AS1Q8NCQ2 148 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 ZNF439Q8NDP4 499 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 OR2K2Q8NGT1 345 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 ACY3Q96HD9 319 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 OR52B2Q96RD2 323 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 ULBP3Q9BZM4 244 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 OR51I2Q9H344 312 aa6.2□□□□□ -1.42
LSM5-210ENST00000480956 YTHDF2Q9Y5A9 579 aaKnown RBP6.2□□□□□ -1.42
LSM5-210ENST00000480956 AHDC1Q5TGY3 1603 aaPredicted RBP6.2□□□□□ -1.42
LSM5-210ENST00000480956 A0A087WWV3 80 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 PPP1R3DO95685 299 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 TRBV12-3P01733 135 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 TTRP02766 147 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 GZMHP20718 246 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 ZNF138P52744 262 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 DSCR9P59020 149 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 HPCAP84074 193 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 PMAIP1Q13794 54 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 TWIST1Q15672 202 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 C9orf57Q5W0N0 161 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 FBXW9Q5XUX1 488 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 C5orf46Q6UWT4 87 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 ZNF567Q8N184 647 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 CCL17Q92583 94 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 SPACA5Q96QH8 159 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 SFXN3Q9BWM7 321 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 PKIGQ9Y2B9 76 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 NUBP2Q9Y5Y2 271 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 DLG5Q8TDM6 1919 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 SMG6Q86US8 1419 aaKnown RBP6.19□□□□□ -1.42
LSM5-210ENST00000480956 PALLDQ8WX93 1383 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 IGSF23A1L1A6 192 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 B8ZZF3 427 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 EDIL3O43854 480 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 CST8O60676 142 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 IGHV3-43DP0DP04 118 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 CDC42P60953 191 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 TGIF1Q15583 401 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 OR4S2Q8NH73 311 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 TM4SF18Q96CE8 201 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 SIGLEC12Q96PQ1 595 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 OR5M11Q96RB7 305 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 SEC22CQ9BRL7 303 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 SS18L2Q9UHA2 77 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 PYCARDQ9ULZ3 195 aa6.19□□□□□ -1.42
LSM5-210ENST00000480956 PLCH1Q4KWH8 1693 aa6.18□□□□□ -1.42
LSM5-210ENST00000480956 FAAHO00519 579 aa6.18□□□□□ -1.42
LSM5-210ENST00000480956 OR2A4O95047 310 aa6.18□□□□□ -1.42
LSM5-210ENST00000480956 APOC1P02654 83 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms