RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 TRAV39A0A0B4J263 110 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 MCRIP1C9JLW8 97 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 ORC5O43913 435 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 FAM106CPP0CH98 169 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 CD24P25063 80 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 DEFA6Q01524 100 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 GABPB1Q06547 395 aaPredicted RBP12.02□□□□□ -0.49
TDP2-205ENST00000480495 MADCAM1Q13477 382 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 GPR50Q13585 617 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 SPHARQ15513 63 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 LTC4SQ16873 150 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 ACSM3Q53FZ2 586 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 UNQ9370/PRO34162Q6UXP9 181 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 ZNF497Q6ZNH5 498 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 THNSL2Q86YJ6 484 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 C11orf44Q8N8P7 122 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 OR52M1Q8NGK5 317 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 WIPF2Q8TF74 440 aaPredicted RBP12.02□□□□□ -0.49
TDP2-205ENST00000480495 NRG4Q8WWG1 115 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 LEAP2Q969E1 77 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 ARL11Q969Q4 196 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 SLC25A33Q9BSK2 321 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 VCX3BQ9H321 246 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 RAB9BQ9NP90 201 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 LSM2Q9Y333 95 aaKnown RBP12.02□□□□□ -0.49
TDP2-205ENST00000480495 TPRKBQ9Y3C4 175 aa12.02□□□□□ -0.49
TDP2-205ENST00000480495 CMYA5Q8N3K9 4069 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 TET2Q6N021 2002 aaPredicted RBP12.01□□□□□ -0.49
TDP2-205ENST00000480495 H0YHG0 523 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 M0QZK8 103 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 CRTAPO75718 401 aaPredicted RBP12.01□□□□□ -0.49
TDP2-205ENST00000480495 MT-ND4P03905 459 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 GLAP06280 429 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 MGMTP16455 207 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 MYF6P23409 242 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 RAB7AP51149 207 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 SLC35A2P78381 396 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 RAB12Q6IQ22 244 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 Q6ZS46 218 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 OR8H3Q8N146 312 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 OR10X1Q8NGY0 326 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 PHYHIPQ92561 330 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 OR5M11Q96RB7 305 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 OCSTAMPQ9BR26 566 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 SELENOIQ9C0D9 397 aa12.01□□□□□ -0.49
TDP2-205ENST00000480495 FAM90A9PA6NNJ1 464 aa12□□□□□ -0.49
TDP2-205ENST00000480495 C15orf65H3BRN8 121 aa12□□□□□ -0.49
TDP2-205ENST00000480495 AIPO00170 330 aa12□□□□□ -0.49
TDP2-205ENST00000480495 KCNAB3O43448 404 aa12□□□□□ -0.49
TDP2-205ENST00000480495 CA11O75493 328 aa12□□□□□ -0.49
TDP2-205ENST00000480495 IGHV3-7P01780 117 aa12□□□□□ -0.49
TDP2-205ENST00000480495 UBBP0CG47 229 aa12□□□□□ -0.49
TDP2-205ENST00000480495 CD28P10747 220 aa12□□□□□ -0.49
TDP2-205ENST00000480495 FUT3P21217 361 aa12□□□□□ -0.49
TDP2-205ENST00000480495 GNG10P50151 68 aa12□□□□□ -0.49
TDP2-205ENST00000480495 EMX1Q04741 257 aaPredicted RBP12□□□□□ -0.49
TDP2-205ENST00000480495 IRF3Q14653 427 aa12□□□□□ -0.49
TDP2-205ENST00000480495 MED22Q15528 200 aa12□□□□□ -0.49
TDP2-205ENST00000480495 TMEM30BQ3MIR4 351 aa12□□□□□ -0.49
TDP2-205ENST00000480495 Q3ZCU0 254 aa12□□□□□ -0.49
TDP2-205ENST00000480495 C8orf31Q8N9H6 132 aa12□□□□□ -0.49
TDP2-205ENST00000480495 CCDC107Q8WV48 283 aa12□□□□□ -0.49
TDP2-205ENST00000480495 Q96M66 194 aa12□□□□□ -0.49
TDP2-205ENST00000480495 TMED9Q9BVK6 235 aa12□□□□□ -0.49
TDP2-205ENST00000480495 ANKRD60Q9BZ19 345 aa12□□□□□ -0.49
TDP2-205ENST00000480495 CST11Q9H112 138 aa12□□□□□ -0.49
TDP2-205ENST00000480495 BANF2Q9H503 90 aa12□□□□□ -0.49
TDP2-205ENST00000480495 DUSP21Q9H596 190 aa12□□□□□ -0.49
TDP2-205ENST00000480495 ETAA1Q9NY74 926 aa12□□□□□ -0.49
TDP2-205ENST00000480495 PEX16Q9Y5Y5 336 aa12□□□□□ -0.49
TDP2-205ENST00000480495 A0A1W2PPI3 338 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 SDCBPO00560 298 aaPredicted RBP11.99□□□□□ -0.49
TDP2-205ENST00000480495 SPINT2O43291 252 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 GP2P55259 537 aaKnown RBP11.99□□□□□ -0.49
TDP2-205ENST00000480495 ABCA11PQ4W5N1 156 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 C6orf183Q5T699 404 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 GLT8D1Q68CQ7 371 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 TRAT1Q6PIZ9 186 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 NDUFA11Q86Y39 141 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 GAPTQ8N292 157 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 LINC00311Q8N616 119 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 TMEM104Q8NE00 496 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 SGCDQ92629 289 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 UFD1Q92890 307 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 GFOD1Q9NXC2 390 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 TRAPPC2LQ9UL33 140 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 MOB4Q9Y3A3 225 aa11.99□□□□□ -0.49
TDP2-205ENST00000480495 RGS10O43665 173 aa11.98□□□□□ -0.49
TDP2-205ENST00000480495 PDCD6O75340 191 aa11.98□□□□□ -0.49
TDP2-205ENST00000480495 SC5DO75845 299 aa11.98□□□□□ -0.49
TDP2-205ENST00000480495 OPN1MWP04001 364 aa11.98□□□□□ -0.49
TDP2-205ENST00000480495 GAPDHP04406 335 aaKnown RBP11.98□□□□□ -0.49
TDP2-205ENST00000480495 SNRNP70P08621 437 aaKnown RBP11.98□□□□□ -0.49
TDP2-205ENST00000480495 OPN1MW2P0DN77 364 aa11.98□□□□□ -0.49
TDP2-205ENST00000480495 OPN1MW3P0DN78 364 aa11.98□□□□□ -0.49
TDP2-205ENST00000480495 HSPA13P48723 471 aa11.98□□□□□ -0.49
TDP2-205ENST00000480495 LOXL3P58215 753 aa11.98□□□□□ -0.49
TDP2-205ENST00000480495 ZNF816Q0VGE8 651 aaPredicted RBP11.98□□□□□ -0.49
TDP2-205ENST00000480495 INSL4Q14641 139 aa11.98□□□□□ -0.49
TDP2-205ENST00000480495 NSUN5P1Q3KNT7 163 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms