RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 TAAR3PQ9P1P4 343 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 COL5A1P20908 1838 aaPredicted RBP9.17□□□□□ -0.94
SIK3-210ENST00000480468 IGKV3D-11A0A0A0MRZ8 115 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 KIR2DS5A0A0G2JLQ3 304 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 A0A0G2JNG1 304 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 TMEM150CB9EJG8 249 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 KIR2DS3K7RE56 304 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 GYPAP02724 150 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 SUMO3P55854 103 aaPredicted RBP9.16□□□□□ -0.94
SIK3-210ENST00000480468 RAC1P63000 192 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 FOXL1Q12952 345 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 KIR2DS5Q14953 304 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 RTP5Q14D33 572 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 KIAA2026Q5HYC2 2103 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 RABEPKQ7Z6M1 372 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 ZNF295-AS1Q8N0V1 137 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 ZNF525Q8N782 197 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 OR4B1Q8NGF8 309 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 PATE1Q8WXA2 126 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 EXTL1Q92935 676 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 LHX4Q969G2 390 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 RPUSD4Q96CM3 377 aaKnown RBP9.16□□□□□ -0.94
SIK3-210ENST00000480468 TECTBQ96PL2 329 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 NCOR1P1Q9H4R4 102 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 MANBALQ9NQG1 85 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 PIGLQ9Y2B2 252 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 MYO7BQ6PIF6 2116 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 NUPR1O60356 82 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 TOMM40O96008 361 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 PDGFBP01127 241 aaPredicted RBP9.16□□□□□ -0.94
SIK3-210ENST00000480468 GCH1P30793 250 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 CDAP32320 146 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 YPEL3P61236 119 aaPredicted RBP9.16□□□□□ -0.94
SIK3-210ENST00000480468 BATFQ16520 125 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 DMRTC1Q5HYR2 192 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 CPEB3Q8NE35 698 aaKnown RBP9.16□□□□□ -0.94
SIK3-210ENST00000480468 WWTR1Q9GZV5 400 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 SLC45A2Q9UMX9 530 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 TIMM9Q9Y5J7 89 aa9.16□□□□□ -0.94
SIK3-210ENST00000480468 DOCK8Q8NF50 2099 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 C5orf63A6NC05 138 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 H0Y980 276 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 MLNRO43193 412 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 PPP1CBP62140 327 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 MFAP5Q13361 173 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 SRSF7Q16629 238 aaKnown RBP eCLIP9.15□□□□□ -0.94
SIK3-210ENST00000480468 HIST3H3Q16695 136 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 CST9LP1Q5W188 147 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 ZNF441Q8N8Z8 693 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 OR2D3Q8NGH3 330 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 MRGPRDQ8TDS7 321 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 ZNF160Q9HCG1 818 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 SLC39A9Q9NUM3 307 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 IL36GQ9NZH8 169 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 WIPI2Q9Y4P8 454 aa9.15□□□□□ -0.94
SIK3-210ENST00000480468 KIAA1324LA8MWY0 1029 aaPredicted RBP9.15□□□□□ -0.95
SIK3-210ENST00000480468 H0Y8X5 98 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 HS3ST1O14792 307 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 CCL25O15444 150 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 TRAF3IP2O43734 574 aaPredicted RBP9.15□□□□□ -0.95
SIK3-210ENST00000480468 PDCD6O75340 191 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 NDUFB8O95169 186 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 TFPI2P48307 235 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 PTTG1IPP53801 180 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 HBG1P69891 147 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 HBG2P69892 147 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 CLEC12BQ2HXU8 276 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 TDRG1Q3Y452 100 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 CDCP2Q5VXM1 449 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 SLC37A2Q8TED4 501 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 CIB3Q96Q77 187 aaPredicted RBP9.15□□□□□ -0.95
SIK3-210ENST00000480468 SPOCK3Q9BQ16 436 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 UBE2ZQ9H832 354 aaPredicted RBP9.15□□□□□ -0.95
SIK3-210ENST00000480468 PAM16Q9Y3D7 125 aa9.15□□□□□ -0.95
SIK3-210ENST00000480468 A0A0U1RQK1 487 aa9.14□□□□□ -0.95
SIK3-210ENST00000480468 ZNF320A2RRD8 509 aa9.14□□□□□ -0.95
SIK3-210ENST00000480468 CNOT4O95628 575 aaKnown RBP9.14□□□□□ -0.95
SIK3-210ENST00000480468 OPN1LWP04000 364 aa9.14□□□□□ -0.95
SIK3-210ENST00000480468 OTX1P32242 354 aaPredicted RBP9.14□□□□□ -0.95
SIK3-210ENST00000480468 FAM78BQ5VT40 261 aa9.14□□□□□ -0.95
SIK3-210ENST00000480468 DYRK2Q92630 601 aa9.14□□□□□ -0.95
SIK3-210ENST00000480468 NEIL1Q96FI4 390 aaPredicted RBP9.14□□□□□ -0.95
SIK3-210ENST00000480468 WDR61Q9GZS3 305 aaKnown RBP9.14□□□□□ -0.95
SIK3-210ENST00000480468 CHODLQ9H9P2 273 aa9.14□□□□□ -0.95
SIK3-210ENST00000480468 SLC7A10Q9NS82 523 aa9.14□□□□□ -0.95
SIK3-210ENST00000480468 CCDC163A0A0D9SF12 145 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 VSTM2BA6NLU5 285 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 TMPRSS2O15393 492 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 ANGPTL7O43827 346 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 OR2J2O76002 312 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 PPBPP02775 128 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 CTRLP40313 264 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 COMPP49747 757 aaPredicted RBP9.13□□□□□ -0.95
SIK3-210ENST00000480468 TMEM267Q0VDI3 215 aaPredicted RBP9.13□□□□□ -0.95
SIK3-210ENST00000480468 MALLQ13021 153 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 UBE2V1Q13404 147 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 CNN3Q15417 329 aaKnown RBP9.13□□□□□ -0.95
SIK3-210ENST00000480468 Q6ZPA2 131 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 ZNF818PQ6ZRF7 136 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms