RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 OR11H6Q8NGC7 330 aa16.11■□□□□ 0.17
LIME1-205ENST00000480139 MRPL30Q8TCC3 161 aaKnown RBP16.11■□□□□ 0.17
LIME1-205ENST00000480139 RAB3CQ96E17 227 aa16.11■□□□□ 0.17
LIME1-205ENST00000480139 SUCNR1Q9BXA5 334 aa16.11■□□□□ 0.17
LIME1-205ENST00000480139 ATG5Q9H1Y0 275 aa16.11■□□□□ 0.17
LIME1-205ENST00000480139 DCSTAMPQ9H295 470 aa16.11■□□□□ 0.17
LIME1-205ENST00000480139 TMEM133Q9H2Q1 129 aa16.11■□□□□ 0.17
LIME1-205ENST00000480139 RHBDL2Q9NX52 303 aa16.11■□□□□ 0.17
LIME1-205ENST00000480139 A0A087X0M5 115 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 TRBV6-6A0A0A6YYG2 114 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 A0A1B0GX30 115 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 NPFFO15130 113 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 MMP23AO75900 390 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 CD34P28906 385 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 SSTR5P35346 364 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 MOGAT2Q3SYC2 334 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 PRAMEF5Q5TYX0 476 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 RUSC1-AS1Q66K80 236 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 PDZD9Q8IXQ8 264 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 PIP4P2Q8N4L2 257 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 OR5H6Q8NGV6 325 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 NDNFQ8TB73 568 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 KIRREL1Q96J84 757 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 CYYR1Q96J86 154 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 SLC6A7Q99884 636 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 PRDM13Q9H4Q3 707 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 RAB9BQ9NP90 201 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 TRAPPC2LQ9UL33 140 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 C2CD3Q4AC94 2353 aa16.1■□□□□ 0.17
LIME1-205ENST00000480139 A0A0A6YYH2 397 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 A0A0A6YYJ9 748 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 A6NJ64 397 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 C15orf65H3BRN8 121 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 MFNGO00587 321 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 HIST1H1DP16402 221 aaKnown RBP16.09■□□□□ 0.17
LIME1-205ENST00000480139 RORCP51449 518 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 PRB3Q04118 309 aaPredicted RBP16.09■□□□□ 0.17
LIME1-205ENST00000480139 TMEM30BQ3MIR4 351 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 MOB1BQ7L9L4 216 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 RTN4RL2Q86UN3 420 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 BCL6BQ8N143 479 aaPredicted RBP16.09■□□□□ 0.17
LIME1-205ENST00000480139 PNKDQ8N490 385 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 OR4K15Q8NH41 348 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 ZNF418Q8TF45 676 aaPredicted RBP16.09■□□□□ 0.17
LIME1-205ENST00000480139 CCDC107Q8WV48 283 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 C22orf15Q8WYQ4 148 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 SLC25A38Q96DW6 304 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 C12orf4Q9NQ89 552 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.09■□□□□ 0.17
LIME1-205ENST00000480139 IDI2-AS1Q9NZ38 188 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 AK3Q9UIJ7 227 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 KCNK7Q9Y2U2 307 aa16.09■□□□□ 0.17
LIME1-205ENST00000480139 IGHV2-26A0A0B4J1V2 119 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 TRAV39A0A0B4J263 110 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 SERPINE3A8MV23 424 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 ODF3BA8MYP8 253 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 C12orf77C9JDV5 145 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 NOL3O60936 208 aaKnown RBP16.08■□□□□ 0.16
LIME1-205ENST00000480139 OMGP23515 440 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 COX7A1P24310 79 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 SAA4P35542 130 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 GDNFP39905 211 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 ZNF626Q68DY1 528 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 ZNF880Q6PDB4 577 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 OR52M1Q8NGK5 317 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 ACOT12Q8WYK0 555 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 CLEC7AQ9BXN2 247 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 ABCG5Q9H222 651 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 JMJD1CQ15652 2540 aa16.08■□□□□ 0.16
LIME1-205ENST00000480139 F2RL2O00254 374 aa16.07■□□□□ 0.16
LIME1-205ENST00000480139 RCC1P18754 421 aaPredicted RBP16.07■□□□□ 0.16
LIME1-205ENST00000480139 UBE2NLQ5JXB2 153 aa16.07■□□□□ 0.16
LIME1-205ENST00000480139 AP3S1Q92572 193 aa16.07■□□□□ 0.16
LIME1-205ENST00000480139 ARL11Q969Q4 196 aa16.07■□□□□ 0.16
LIME1-205ENST00000480139 ISOC1Q96CN7 298 aa16.07■□□□□ 0.16
LIME1-205ENST00000480139 CMTM3Q96MX0 182 aa16.07■□□□□ 0.16
LIME1-205ENST00000480139 ZNF48Q96MX3 618 aaPredicted RBP16.07■□□□□ 0.16
LIME1-205ENST00000480139 OCEL1Q9H607 264 aa16.07■□□□□ 0.16
LIME1-205ENST00000480139 KCNIP1Q9NZI2 227 aa16.07■□□□□ 0.16
LIME1-205ENST00000480139 MGAT4AQ9UM21 535 aa16.07■□□□□ 0.16
LIME1-205ENST00000480139 CEPT1Q9Y6K0 416 aa16.07■□□□□ 0.16
LIME1-205ENST00000480139 CUBNO60494 3623 aa16.07■□□□□ 0.16
LIME1-205ENST00000480139 MEIOCA2RUB1 952 aa16.06■□□□□ 0.16
LIME1-205ENST00000480139 SPINT2O43291 252 aa16.06■□□□□ 0.16
LIME1-205ENST00000480139 TCF21O43680 179 aa16.06■□□□□ 0.16
LIME1-205ENST00000480139 GNB3P16520 340 aa16.06■□□□□ 0.16
LIME1-205ENST00000480139 ZNF182P17025 639 aaPredicted RBP16.06■□□□□ 0.16
LIME1-205ENST00000480139 HILS1P60008 231 aa16.06■□□□□ 0.16
LIME1-205ENST00000480139 SPCS2Q15005 226 aa16.06■□□□□ 0.16
LIME1-205ENST00000480139 PRIMA1Q86XR5 153 aa16.06■□□□□ 0.16
LIME1-205ENST00000480139 CMSS1Q9BQ75 279 aaKnown RBP16.06■□□□□ 0.16
LIME1-205ENST00000480139 CHMP1AQ9HD42 196 aaPredicted RBP16.06■□□□□ 0.16
LIME1-205ENST00000480139 TBL2Q9Y4P3 447 aaKnown RBP16.06■□□□□ 0.16
LIME1-205ENST00000480139 SOX21Q9Y651 276 aaPredicted RBP16.06■□□□□ 0.16
LIME1-205ENST00000480139 A0A0U1RQK1 487 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 H3BMQ9 156 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 GSTP1P09211 210 aaKnown RBP16.05■□□□□ 0.16
LIME1-205ENST00000480139 CD3GP09693 182 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 HMGN3Q15651 99 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 DEFB112Q30KQ8 113 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms