RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TLE1Q04724 770 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 TFF3Q07654 80 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 ATXN7L3Q14CW9 347 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-204ENST00000480057 CR1LQ2VPA4 569 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 TEX36Q5VZQ5 186 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 GSG1LQ6UXU4 331 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 ZNF561Q8N587 486 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 LRTM2Q8N967 370 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 ZNF565Q8N9K5 539 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 OR5T2Q8NGG2 359 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 OR5D13Q8NGL4 314 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 CASTOR1Q8WTX7 329 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 TOMM40LQ969M1 308 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 SDSLQ96GA7 329 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 KIRREL1Q96J84 757 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 LURAP1Q96LR2 239 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 GON7Q9BXV9 100 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 CHIAQ9BZP6 476 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 FAM234AQ9H0X4 552 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 DNTTIP1Q9H147 329 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 SLA2Q9H6Q3 261 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 NAA60Q9H7X0 242 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 RAB9BQ9NP90 201 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 SLC2A9Q9NRM0 540 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 OR2W1Q9Y3N9 320 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 GPR31O00270 319 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 BET1O15155 118 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 ATXN7O15265 892 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-204ENST00000480057 CLDN14O95500 239 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 PI3P19957 117 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 NFYAP23511 347 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-204ENST00000480057 S100GP29377 79 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 CEBPDP49716 269 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-204ENST00000480057 FXYD4P59646 89 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 SLC9A3R2Q15599 337 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 MSMO1Q15800 293 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 KRBOX4Q5JUW0 171 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 DCAF12L2Q5VW00 463 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 STUMQ69YW2 141 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 LAMTOR1Q6IAA8 161 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 LDLRAD3Q86YD5 345 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 C1orf87Q8N0U7 546 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 ANGPTL6Q8NI99 470 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 LINC01560Q8TB33 94 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 RTN4IP1Q8WWV3 396 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-204ENST00000480057 COQ2Q96H96 371 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 AKR1E2Q96JD6 320 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 NMES1Q9C002 83 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 SHARPINQ9H0F6 387 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 TAF9BQ9HBM6 251 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 PPP1R3CQ9UQK1 317 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 LAMA5O15230 3695 aa9.23□□□□□ -0.93
VTI1A-204ENST00000480057 SPTA1P02549 2419 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 CADP27708 2225 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 C3orf80F5H4A9 247 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 K7N7A8 449 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 SIX6O95475 246 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 HEXAP06865 529 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 SLC25A4P12235 298 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 GZMHP20718 246 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 LOXP28300 417 aaPredicted RBP9.22□□□□□ -0.93
VTI1A-204ENST00000480057 GNRHRP30968 328 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 ANKRD55Q3KP44 614 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 ZNF672Q499Z4 452 aaPredicted RBP9.22□□□□□ -0.93
VTI1A-204ENST00000480057 SPRNQ5BIV9 151 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 TMEM65Q6PI78 240 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 CMTM1Q8IZ96 169 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 BVESQ8NE79 360 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 OR11H4Q8NGC9 324 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 GALMQ96C23 342 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 PDCD10Q9BUL8 212 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 SLC5A7Q9GZV3 580 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 DYNLRB1Q9NP97 96 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 COMMD9Q9P000 198 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 KIF25Q9UIL4 384 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 HSPB11Q9Y547 144 aa9.22□□□□□ -0.93
VTI1A-204ENST00000480057 DUXBA0A1W2PPF3 345 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 DEFB108AA8MXU0 73 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 LGALS8O00214 317 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 MPPED1O15442 326 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 FSTL3O95633 263 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 GABRA2P47869 451 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 LUMP51884 338 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-204ENST00000480057 P2RX3P56373 397 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 HTD2P86397 168 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 IFITM2Q01629 132 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 AESQ08117 197 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 TMEM187Q14656 261 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 SWI5Q1ZZU3 235 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 MST1LQ2TV78 715 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 TMEM30BQ3MIR4 351 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 LIAT1Q6ZQX7 453 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 LGI3Q8N145 548 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 ASCC1Q8N9N2 400 aaKnown RBP9.21□□□□□ -0.94
VTI1A-204ENST00000480057 ZBTB34Q8NCN2 500 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 OR10V1Q8NGI7 309 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 TMEM246Q9BRR3 403 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 ZNF665Q9H7R5 613 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 SAP30LQ9HAJ7 183 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 CISD1Q9NZ45 108 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms