RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 DMKNQ6E0U4 476 aaPredicted RBP13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 LAIR2Q6ISS4 152 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 CCDC144NLQ6NUI1 221 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 MOB3BQ86TA1 216 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 JAGN1Q8N5M9 183 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 Q8NFD4 153 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 OR4X2Q8NGF9 303 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 OR10V1Q8NGI7 309 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 OR4K15Q8NH41 348 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 TMEM80Q96HE8 168 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 TSSC4Q9Y5U2 329 aaPredicted RBP13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 TMEM30CPA0ZSE6 113 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 FAM90A18PA6NE21 464 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 FAM90A16PA6NEW6 464 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 FAM90A20PA6NIJ5 464 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 FAM90A9PA6NNJ1 464 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 FAM90A12PA8MX19 464 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 FAM90A5PA8MXJ8 464 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 C15orf65H3BRN8 121 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 SDCBPO00560 298 aaPredicted RBP13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 HSD17B6O14756 317 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 FAM90A15PP0C7V4 464 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 FAM90A13PP0C7W8 464 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 FAM90A14PP0C7W9 464 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 FAM90A24PP0C7X0 464 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 FAM106CPP0CH98 169 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 HOXD3P31249 432 aaPredicted RBP13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 ADARB1P78563 741 aaKnown RBP13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 ST3GAL4Q11206 333 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 INSL4Q14641 139 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 GLIPR1L1Q6UWM5 242 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 LCNL1Q6ZST4 164 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 PRR18Q8N4B5 295 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 C5orf56Q8N8D9 126 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 CREB3L1Q96BA8 519 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 DUX3Q96PT4 197 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 NECAP2Q9NVZ3 263 aa13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 MRPS28Q9Y2Q9 187 aaKnown RBP13.77□□□□□ -0.21
ECHDC1-216ENST00000479525 PSMB11A5LHX3 300 aa13.76□□□□□ -0.21
ECHDC1-216ENST00000479525 ZNF736B4DX44 427 aaPredicted RBP13.76□□□□□ -0.21
ECHDC1-216ENST00000479525 Q499Y3 187 aa13.76□□□□□ -0.21
ECHDC1-216ENST00000479525 AHSA2Q719I0 299 aa13.76□□□□□ -0.21
ECHDC1-216ENST00000479525 DHRSXQ8N5I4 330 aa13.76□□□□□ -0.21
ECHDC1-216ENST00000479525 ZNF485Q8NCK3 441 aa13.76□□□□□ -0.21
ECHDC1-216ENST00000479525 RDH12Q96NR8 316 aa13.76□□□□□ -0.21
ECHDC1-216ENST00000479525 IL36GQ9NZH8 169 aa13.76□□□□□ -0.21
ECHDC1-216ENST00000479525 IGHV1-3A0A0C4DH29 117 aa13.75□□□□□ -0.21
ECHDC1-216ENST00000479525 OOSP1A8MZH6 123 aa13.75□□□□□ -0.21
ECHDC1-216ENST00000479525 AIPO00170 330 aa13.75□□□□□ -0.21
ECHDC1-216ENST00000479525 CCRL2O00421 344 aa13.75□□□□□ -0.21
ECHDC1-216ENST00000479525 KRTAP10-11P60412 298 aa13.75□□□□□ -0.21
ECHDC1-216ENST00000479525 AWAT2Q6E213 333 aa13.75□□□□□ -0.21
ECHDC1-216ENST00000479525 ETV3LQ6ZN32 361 aa13.75□□□□□ -0.21
ECHDC1-216ENST00000479525 C8orf86Q6ZUL3 223 aa13.75□□□□□ -0.21
ECHDC1-216ENST00000479525 OR1L1Q8NH94 360 aa13.75□□□□□ -0.21
ECHDC1-216ENST00000479525 FAM46BQ96A09 425 aa13.75□□□□□ -0.21
ECHDC1-216ENST00000479525 KCNK15Q9H427 330 aa13.75□□□□□ -0.21
ECHDC1-216ENST00000479525 LINC00574Q9H8X3 128 aa13.75□□□□□ -0.21
ECHDC1-216ENST00000479525 CHCHD3Q9NX63 227 aaKnown RBP13.75□□□□□ -0.21
ECHDC1-216ENST00000479525 TRBV5-7A0A0A0MS05 114 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 UBE2QL1A1L167 161 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 SERPINE3A8MV23 424 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 MT-ND4P03905 459 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 GTF2F2P13984 249 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 KCNJ3P48549 501 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 LOXL3P58215 753 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 NHLRC3Q5JS37 347 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 FAM27D1Q5T7N8 215 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 SYT6Q5T7P8 510 aaPredicted RBP13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 TTC23Q5W5X9 447 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 ZNF497Q6ZNH5 498 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 TMEM104Q8NE00 496 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 BPIFB6Q8NFQ5 453 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 HAVCR2Q8TDQ0 301 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 GFOD1Q9NXC2 390 aa13.74□□□□□ -0.21
ECHDC1-216ENST00000479525 IRGMA1A4Y4 181 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 NCBP2LA6PVI3 153 aaKnown RBP13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 C12orf77C9JDV5 145 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 K7EIL1 84 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 RCC1P18754 421 aaPredicted RBP13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 CELP19835 753 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 RAB7AP51149 207 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 GNMTQ14749 295 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 MPV17LQ2QL34 196 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 THNSL2Q86YJ6 484 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 OR8H3Q8N146 312 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 SETD9Q8NE22 299 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 EAF1Q96JC9 268 aaPredicted RBP13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 DERL3Q96Q80 235 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 SELENOIQ9C0D9 397 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 NCOR1P1Q9H4R4 102 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 IFT22Q9H7X7 185 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 ETAA1Q9NY74 926 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 TRAPPC2LQ9UL33 140 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 PEX16Q9Y5Y5 336 aa13.73□□□□□ -0.21
ECHDC1-216ENST00000479525 WI2-2373I1.2A0A1W2PRP0 233 aa13.72□□□□□ -0.21
ECHDC1-216ENST00000479525 CRTAPO75718 401 aaPredicted RBP13.72□□□□□ -0.21
ECHDC1-216ENST00000479525 ZNF134P52741 427 aa13.72□□□□□ -0.21
ECHDC1-216ENST00000479525 PAX5Q02548 391 aa13.72□□□□□ -0.21
ECHDC1-216ENST00000479525 ZNF816Q0VGE8 651 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms