RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 SPAARA0A1B0GVQ0 90 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 PRR19A6NJB7 356 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 J3QRE1 110 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 RAMP1O60894 148 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 HEXAP06865 529 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 FREM3P0C091 2139 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 POLR2GP62487 172 aaKnown RBP eCLIP12.48□□□□□ -0.41
COL20A1-206ENST00000479501 COTL1Q14019 142 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 MRPL24Q96A35 216 aaKnown RBP12.48□□□□□ -0.41
COL20A1-206ENST00000479501 SLC35E1Q96K37 410 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 SLC26A1Q9H2B4 701 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 DOCK8Q8NF50 2099 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 MFSD2BA6NFX1 497 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 ABCD4O14678 606 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 GATCO43716 136 aaKnown RBP12.47□□□□□ -0.41
COL20A1-206ENST00000479501 IL3RAP26951 378 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 SLC23A3Q6PIS1 610 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 CPEB3Q8NE35 698 aaKnown RBP12.47□□□□□ -0.41
COL20A1-206ENST00000479501 TAAR6Q96RI8 345 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 DDA1Q9BW61 102 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 RTN4RQ9BZR6 473 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 NOTCH4Q99466 2003 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 IGLV3-12A0A075B6K2 115 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 TRDCB7Z8K6 153 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 CDIPTO14735 213 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 BSXQ3C1V8 233 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 RIPPLY2Q5TAB7 128 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 FNDC7Q5VTL7 733 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 AQP3Q92482 292 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 DYRK2Q92630 601 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 COL4A6Q14031 1691 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 IGKV1D-43A0A0B4J1Z2 117 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 PRF1P14222 555 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 TMEM267Q0VDI3 215 aaPredicted RBP12.47□□□□□ -0.41
COL20A1-206ENST00000479501 LILRB1Q8NHL6 650 aaPredicted RBP12.47□□□□□ -0.41
COL20A1-206ENST00000479501 NAT8BQ9UHF3 227 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 CHCHD2Q9Y6H1 151 aaPredicted RBP12.47□□□□□ -0.41
COL20A1-206ENST00000479501 CACNA1DQ01668 2161 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 J3QT63 122 aa12.47□□□□□ -0.41
COL20A1-206ENST00000479501 NFAM1Q8NET5 270 aaPredicted RBP12.47□□□□□ -0.41
COL20A1-206ENST00000479501 ESRP2Q9H6T0 727 aaKnown RBP12.47□□□□□ -0.41
COL20A1-206ENST00000479501 K7EQM0 130 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 ZNF737O75373 536 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 FCER1GP30273 86 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 OR3A1P47881 315 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 DLK1P80370 383 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 PRR27Q6MZM9 219 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 TBC1D26Q86UD7 250 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 OR2T10Q8NGZ9 312 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 PARP11Q9NR21 331 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 PI4KAP42356 2102 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 PTTG1IPP53801 180 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 ERVS71-1P61550 626 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 C21orf62-AS1Q17RA5 79 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 FAM219AQ8IW50 185 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 LOXL4Q96JB6 756 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 CACNG5Q9UF02 275 aa12.46□□□□□ -0.41
COL20A1-206ENST00000479501 VDAC1P21796 283 aa12.46□□□□□ -0.42
COL20A1-206ENST00000479501 BMP5P22003 454 aa12.46□□□□□ -0.42
COL20A1-206ENST00000479501 CFHR1Q03591 330 aa12.46□□□□□ -0.42
COL20A1-206ENST00000479501 ZNF596Q8TC21 504 aa12.46□□□□□ -0.42
COL20A1-206ENST00000479501 VOPP1Q96AW1 172 aa12.46□□□□□ -0.42
COL20A1-206ENST00000479501 TINAGQ9UJW2 476 aa12.46□□□□□ -0.42
COL20A1-206ENST00000479501 YIF1AO95070 293 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 OR5G3P0C626 314 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 FGF8P55075 233 aaPredicted RBP12.45□□□□□ -0.42
COL20A1-206ENST00000479501 ETFRF1Q6IPR1 90 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 OR10A7Q8NGE5 316 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 GPR132Q9UNW8 380 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 TRGV10A0A0A0MS01 117 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 H3BQ15 152 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 M0R1X1 148 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 ZNF25P17030 456 aaPredicted RBP12.45□□□□□ -0.42
COL20A1-206ENST00000479501 LPAR6P43657 344 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 RBM11P57052 281 aaKnown RBP12.45□□□□□ -0.42
COL20A1-206ENST00000479501 RPS16P62249 146 aaKnown RBP12.45□□□□□ -0.42
COL20A1-206ENST00000479501 NAAAQ02083 359 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 TMEM255AQ5JRV8 349 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 GFRALQ6UXV0 394 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 LYZL2Q7Z4W2 148 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 PPP1R32Q7Z5V6 425 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 TCTEX1D1Q8N7M0 179 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 LRRC29Q8WV35 223 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 SOSTQ9BQB4 213 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 PKIAP61925 76 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 UBE2V2Q15819 145 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 GAPTQ8N292 157 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 A0A0B4J293 547 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 DUXBA0A1W2PPF3 345 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 KIAA1324LA8MWY0 1029 aaPredicted RBP12.45□□□□□ -0.42
COL20A1-206ENST00000479501 FCN1O00602 326 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 GDF9O60383 454 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 NPIPB7O75200 414 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 PTBP3O95758 552 aaKnown RBP12.45□□□□□ -0.42
COL20A1-206ENST00000479501 MUC1P15941 1255 aaPredicted RBP12.45□□□□□ -0.42
COL20A1-206ENST00000479501 SLC38A11Q08AI6 406 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 SNAI3Q3KNW1 292 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 Q5BKY6 102 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 FFAR4Q5NUL3 377 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 SRXN1Q9BYN0 137 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms