RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SRSF12Q8WXF0 261 aaKnown RBP3.15□□□□□ -1.91
CCDC171-207ENST00000478913 ARPC1AQ92747 370 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 YIPF5Q969M3 257 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 FAM104AQ969W3 186 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 PPP1R36Q96LQ0 422 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 OR2M2Q96R28 347 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 OR52B2Q96RD2 323 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 DOHHQ9BU89 302 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 TRIM62Q9BVG3 475 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 POTEKPQ9BYX7 375 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 ROGDIQ9GZN7 287 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 C20orf85Q9H1P6 137 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 PPA2Q9H2U2 334 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 REEP4Q9H6H4 257 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 WDR55Q9H6Y2 383 aaPredicted RBP3.15□□□□□ -1.91
CCDC171-207ENST00000478913 RPRD1BQ9NQG5 326 aaKnown RBP3.15□□□□□ -1.91
CCDC171-207ENST00000478913 INIPQ9NRY2 104 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 SMOXQ9NWM0 555 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 CCDC167Q9P0B6 97 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 TMEM216Q9P0N5 145 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 NUFIP1Q9UHK0 495 aaKnown RBP3.15□□□□□ -1.91
CCDC171-207ENST00000478913 ZNF223Q9UK11 482 aaPredicted RBP3.15□□□□□ -1.91
CCDC171-207ENST00000478913 RNF11Q9Y3C5 154 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 HEBP2Q9Y5Z4 205 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 HSPE1-MOB4S4R3N1 261 aa3.15□□□□□ -1.91
CCDC171-207ENST00000478913 CCDC182A6NF36 153 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 J3QRK9 145 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 L7N2F9 121 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 ARPC3O15145 178 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 ACOX3O15254 700 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 TPST1O60507 370 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 NOS1APO75052 506 aaPredicted RBP3.14□□□□□ -1.91
CCDC171-207ENST00000478913 UPK1BO75841 260 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 ATP5LO75964 103 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 SNAPC5O75971 98 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 DIRAS1O95057 198 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 CRYZL1O95825 349 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 IGKV3-11P04433 115 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 TFPTP0C1Z6 253 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 CHTF8P0CG12 524 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 TRAPPC2P0DI81 140 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 TRAPPC2BP0DI82 140 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 ZNF32P17041 273 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 M6PRP20645 277 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 PSMB9P28065 219 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 PEBP1P30086 187 aaKnown RBP3.14□□□□□ -1.91
CCDC171-207ENST00000478913 RRM2P31350 389 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 IFNA8P32881 189 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 TGFBR2P37173 567 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 GLP1RP43220 463 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 SPINT3P49223 89 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 INPP1P49441 399 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 PPOXP50336 477 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 GPM6AP51674 278 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 BLVRAP53004 296 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 DLX1P56177 255 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 CTBP2P56545 445 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 RAB14P61106 215 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 IL5RAQ01344 420 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 DPYSL2Q16555 572 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 PTPN20Q4JDL3 420 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 OR2G6Q5TZ20 316 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 ZNF470Q6ECI4 717 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 NANOGP8Q6NSW7 305 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 PAGE2Q7Z2X7 111 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 ZNF429Q86V71 674 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 PDZD9Q8IXQ8 264 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 PLPP5Q8NEB5 264 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 FAM83FQ8NEG4 500 aaPredicted RBP3.14□□□□□ -1.91
CCDC171-207ENST00000478913 OR52K1Q8NGK4 314 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 OR9Q1Q8NGQ5 310 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 JOSD2Q8TAC2 188 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 FNDC9Q8TBE3 224 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 CANT1Q8WVQ1 401 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 TUBGCP3Q96CW5 907 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 RNF145Q96MT1 663 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 RNF2Q99496 336 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 GPR22Q99680 433 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 CCDC32Q9BV29 185 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 OR11A1Q9GZK7 315 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 ARMC7Q9H6L4 198 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 NEK6Q9HC98 313 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 ENOPH1Q9UHY7 261 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 ENPP5Q9UJA9 477 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 KLK12Q9UKR0 248 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 POLDIP2Q9Y2S7 368 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 FIS1Q9Y3D6 152 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 CHTOPQ9Y3Y2 248 aaKnown RBP3.14□□□□□ -1.91
CCDC171-207ENST00000478913 WSB1Q9Y6I7 421 aa3.14□□□□□ -1.91
CCDC171-207ENST00000478913 ARHGAP32A7KAX9 2087 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 A0A0J9YYE9 177 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 SNTNA6NMZ2 147 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 EFCAB9A8MZ26 197 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 RNASEK-C17orf49H0YIS7 233 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 TRAPPC2LH3BP13 241 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 AZIN1O14977 448 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 GCM2O75603 506 aaPredicted RBP3.13□□□□□ -1.91
CCDC171-207ENST00000478913 SCGNO76038 276 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 SCELO95171 688 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 MOSP00540 346 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms