RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 ZNF580Q9UK33 172 aa13.31□□□□□ -0.28
VIM-204ENST00000478746 FKBP6O75344 327 aa13.3□□□□□ -0.28
VIM-204ENST00000478746 MT-ND2P03891 347 aa13.3□□□□□ -0.28
VIM-204ENST00000478746 SSTR5P35346 364 aa13.3□□□□□ -0.28
VIM-204ENST00000478746 ISL1P61371 349 aa13.3□□□□□ -0.28
VIM-204ENST00000478746 TMEM104Q8NE00 496 aa13.3□□□□□ -0.28
VIM-204ENST00000478746 OR10H4Q8NGA5 316 aa13.3□□□□□ -0.28
VIM-204ENST00000478746 RTN4IP1Q8WWV3 396 aaPredicted RBP13.3□□□□□ -0.28
VIM-204ENST00000478746 IL4I1Q96RQ9 567 aa13.3□□□□□ -0.28
VIM-204ENST00000478746 WARS2Q9UGM6 360 aaKnown RBP13.3□□□□□ -0.28
VIM-204ENST00000478746 WSB1Q9Y6I7 421 aa13.3□□□□□ -0.28
VIM-204ENST00000478746 TRAV39A0A0B4J263 110 aa13.29□□□□□ -0.28
VIM-204ENST00000478746 TRAV24A0A0B4J272 114 aa13.29□□□□□ -0.28
VIM-204ENST00000478746 TCRBV3S1A0A5B6 114 aa13.29□□□□□ -0.28
VIM-204ENST00000478746 ZNF736B4DX44 427 aaPredicted RBP13.29□□□□□ -0.28
VIM-204ENST00000478746 ANKRD65E5RJM6 399 aa13.29□□□□□ -0.28
VIM-204ENST00000478746 IGHV4-30-4P0DP06 118 aa13.29□□□□□ -0.28
VIM-204ENST00000478746 DBTP11182 482 aaKnown RBP13.29□□□□□ -0.28
VIM-204ENST00000478746 PPIFP30405 207 aaKnown RBP13.29□□□□□ -0.28
VIM-204ENST00000478746 RSBN1Q5VWQ0 802 aaPredicted RBP13.29□□□□□ -0.28
VIM-204ENST00000478746 CNIH3Q8TBE1 160 aa13.29□□□□□ -0.28
VIM-204ENST00000478746 OR51J1Q9H342 316 aa13.29□□□□□ -0.28
VIM-204ENST00000478746 FAM118AQ9NWS6 357 aa13.29□□□□□ -0.28
VIM-204ENST00000478746 ZNF107Q9UII5 783 aaPredicted RBP13.29□□□□□ -0.28
VIM-204ENST00000478746 GNG8Q9UK08 70 aa13.29□□□□□ -0.28
VIM-204ENST00000478746 MAGEA13PA6NCF6 341 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 APOL3O95236 402 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 GZMHP20718 246 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 IL3RAP26951 378 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 ATP6V1E1P36543 226 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 MTNR1BP49286 362 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 RAB9AP51151 201 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 SLURP1P55000 103 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 C12orf73Q69YU5 71 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 ACSM6Q6P461 480 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 FAM220AQ7Z4H9 259 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 LINC00311Q8N616 119 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 OR13C9Q8NGT0 318 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 OR2G2Q8NGZ5 317 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 PLPPR1Q8TBJ4 325 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 ST6GALNAC6Q969X2 333 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 MBOAT4Q96T53 435 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 MYRFQ9Y2G1 1151 aa13.28□□□□□ -0.28
VIM-204ENST00000478746 ZAR1LA6NP61 321 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 G3V318 75 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 MITFO75030 526 aaPredicted RBP13.27□□□□□ -0.29
VIM-204ENST00000478746 IGLV1-40P01703 118 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 ISG15P05161 165 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 EPHA2P29317 976 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 KCNJ3P48549 501 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 PAX5Q02548 391 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 GALEQ14376 348 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 TP53I3Q53FA7 332 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 C10orf67Q8IYJ2 551 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 Q8N1Y9 231 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 RNF166Q96A37 237 aaPredicted RBP13.27□□□□□ -0.29
VIM-204ENST00000478746 RBMXL1Q96E39 390 aaKnown RBP13.27□□□□□ -0.29
VIM-204ENST00000478746 OR4C12Q96R67 309 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 SPATA25Q9BR10 227 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 ALX4Q9H161 411 aaPredicted RBP13.27□□□□□ -0.29
VIM-204ENST00000478746 C19orf73Q9NVV2 129 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 FRRS1LQ9P0K9 344 aa13.27□□□□□ -0.29
VIM-204ENST00000478746 A8MZ25 164 aa13.26□□□□□ -0.29
VIM-204ENST00000478746 LINC01619G3V211 115 aa13.26□□□□□ -0.29
VIM-204ENST00000478746 IFNA6P05013 189 aa13.26□□□□□ -0.29
VIM-204ENST00000478746 SLC2A2P11168 524 aaPredicted RBP13.26□□□□□ -0.29
VIM-204ENST00000478746 KISS1Q15726 138 aa13.26□□□□□ -0.29
VIM-204ENST00000478746 ELP2Q6IA86 826 aa13.26□□□□□ -0.29
VIM-204ENST00000478746 SGPP2Q8IWX5 399 aa13.26□□□□□ -0.29
VIM-204ENST00000478746 C8orf31Q8N9H6 132 aa13.26□□□□□ -0.29
VIM-204ENST00000478746 OR52M1Q8NGK5 317 aa13.26□□□□□ -0.29
VIM-204ENST00000478746 OR13C3Q8NGS6 347 aa13.26□□□□□ -0.29
VIM-204ENST00000478746 ARPC1AQ92747 370 aa13.26□□□□□ -0.29
VIM-204ENST00000478746 ZCCHC4Q9H5U6 513 aa13.26□□□□□ -0.29
VIM-204ENST00000478746 FAM90A10PA6NDY2 464 aa13.25□□□□□ -0.29
VIM-204ENST00000478746 SDCBPO00560 298 aaPredicted RBP13.25□□□□□ -0.29
VIM-204ENST00000478746 OR8U9P0C7N5 309 aa13.25□□□□□ -0.29
VIM-204ENST00000478746 MYF6P23409 242 aa13.25□□□□□ -0.29
VIM-204ENST00000478746 LYPD6Q86Y78 171 aa13.25□□□□□ -0.29
VIM-204ENST00000478746 OR10AC1Q8NH08 325 aa13.25□□□□□ -0.29
VIM-204ENST00000478746 ARL11Q969Q4 196 aa13.25□□□□□ -0.29
VIM-204ENST00000478746 TXNL1O43396 289 aa13.24□□□□□ -0.29
VIM-204ENST00000478746 PITPNAQ00169 270 aa13.24□□□□□ -0.29
VIM-204ENST00000478746 ZNF85Q03923 595 aa13.24□□□□□ -0.29
VIM-204ENST00000478746 IL13RA2Q14627 380 aa13.24□□□□□ -0.29
VIM-204ENST00000478746 ZNF691Q5VV52 312 aa13.24□□□□□ -0.29
VIM-204ENST00000478746 OR51A4Q8NGJ6 313 aa13.24□□□□□ -0.29
VIM-204ENST00000478746 UBALD1Q8TB05 177 aa13.24□□□□□ -0.29
VIM-204ENST00000478746 EME1Q96AY2 570 aa13.24□□□□□ -0.29
VIM-204ENST00000478746 TOLLIPQ9H0E2 274 aa13.24□□□□□ -0.29
VIM-204ENST00000478746 GFOD1Q9NXC2 390 aa13.24□□□□□ -0.29
VIM-204ENST00000478746 ENOPH1Q9UHY7 261 aa13.24□□□□□ -0.29
VIM-204ENST00000478746 AP4S1Q9Y587 144 aa13.24□□□□□ -0.29
VIM-204ENST00000478746 PLECQ15149 4684 aaKnown RBP13.24□□□□□ -0.29
VIM-204ENST00000478746 IGHV3-43A0A0B4J1X8 118 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 TRAV41A0A0B4J266 112 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 C15orf65H3BRN8 121 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 ATP6V0E1O15342 81 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 IGHV3-43DP0DP04 118 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 NANOS3P60323 173 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms