RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 ODF4Q2M2E3 257 aa9.04□□□□□ -0.96
HDAC8-217ENST00000478743 DEFB114Q30KQ6 69 aa9.04□□□□□ -0.96
HDAC8-217ENST00000478743 RSBN1Q5VWQ0 802 aaPredicted RBP9.04□□□□□ -0.96
HDAC8-217ENST00000478743 LIN54Q6MZP7 749 aa9.04□□□□□ -0.96
HDAC8-217ENST00000478743 UNQ5815/PRO19632Q6UWF5 114 aa9.04□□□□□ -0.96
HDAC8-217ENST00000478743 LINC00311Q8N616 119 aa9.04□□□□□ -0.96
HDAC8-217ENST00000478743 BBS1Q8NFJ9 593 aa9.04□□□□□ -0.96
HDAC8-217ENST00000478743 FAM162AQ96A26 154 aa9.04□□□□□ -0.96
HDAC8-217ENST00000478743 BORCS8Q96FH0 119 aa9.04□□□□□ -0.96
HDAC8-217ENST00000478743 ZC4H2Q9NQZ6 224 aa9.04□□□□□ -0.96
HDAC8-217ENST00000478743 CMC2Q9NRP2 79 aa9.04□□□□□ -0.96
HDAC8-217ENST00000478743 MBNL3Q9NUK0 354 aaKnown RBP9.04□□□□□ -0.96
HDAC8-217ENST00000478743 VPS13BQ7Z7G8 4022 aa9.04□□□□□ -0.96
HDAC8-217ENST00000478743 IGKV1-9A0A0C4DH69 117 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 SEMG1P04279 462 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 INAFM2P0DMQ5 153 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 ZNF3P17036 446 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 RRM2P31350 389 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 FCGR2BP31994 310 aaPredicted RBP9.03□□□□□ -0.96
HDAC8-217ENST00000478743 FUT6P51993 359 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 ACTBL2Q562R1 376 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 RASSF6Q6ZTQ3 369 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 Q6ZWC4 215 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 HDXQ7Z353 690 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 RDH10Q8IZV5 341 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 ABHD5Q8WTS1 349 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 TSEN15Q8WW01 171 aaKnown RBP9.03□□□□□ -0.96
HDAC8-217ENST00000478743 RDH12Q96NR8 316 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 FBXL15Q9H469 300 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 LAMP5Q9UJQ1 280 aa9.03□□□□□ -0.96
HDAC8-217ENST00000478743 RIIAD1A6NNX1 92 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 GSTA4O15217 222 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 RBMXL2O75526 392 aaKnown RBP9.02□□□□□ -0.97
HDAC8-217ENST00000478743 NDUFA3O95167 84 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 MRPL3P09001 348 aaKnown RBP9.02□□□□□ -0.97
HDAC8-217ENST00000478743 ZNF134P52741 427 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 TMEM177Q53S58 311 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 PYHIN1Q6K0P9 492 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 RPL13AP3Q6NVV1 102 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 CD200R1LQ6Q8B3 271 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 SLC16A12Q6ZSM3 486 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 SLC25A48Q6ZT89 311 aaKnown RBP9.02□□□□□ -0.97
HDAC8-217ENST00000478743 PPP1R27Q86WC6 154 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 ELMOD2Q8IZ81 293 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 TMEM217Q8N7C4 229 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 ZNF439Q8NDP4 499 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 LFNGQ8NES3 379 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 OR5D18Q8NGL1 313 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 C11orf45Q8TAV5 145 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 FBLIM1Q8WUP2 373 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 MRPL20Q9BYC9 149 aaKnown RBP9.02□□□□□ -0.97
HDAC8-217ENST00000478743 CST11Q9H112 138 aa9.02□□□□□ -0.97
HDAC8-217ENST00000478743 FLG2Q5D862 2391 aaPredicted RBP9.01□□□□□ -0.97
HDAC8-217ENST00000478743 TRAV24A0A0B4J272 114 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 LOC110117498-PIK3R3F6TDL0 507 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 C15orf65H3BRN8 121 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 DEFB4AO15263 64 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 OR2A4O95047 310 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 GASTP01350 101 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 IFNGP01579 166 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 IFNA4P05014 189 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 CCL1P22362 96 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 C21orf33P30042 268 aaPredicted RBP9.01□□□□□ -0.97
HDAC8-217ENST00000478743 ZNF137PP52743 207 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 SF3A3Q12874 501 aaKnown RBP eCLIP9.01□□□□□ -0.97
HDAC8-217ENST00000478743 ZNF829Q3KNS6 432 aaPredicted RBP9.01□□□□□ -0.97
HDAC8-217ENST00000478743 BCL2L15Q5TBC7 163 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 FAHD1Q6P587 224 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 TCTEX1D1Q8N7M0 179 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 ZNF565Q8N9K5 539 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 OR2T33Q8NG76 320 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 RP9Q8TA86 221 aaKnown RBP9.01□□□□□ -0.97
HDAC8-217ENST00000478743 DYNLRB2Q8TF09 96 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 CACNG8Q8WXS5 425 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 RCN3Q96D15 328 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 ZNF251Q9BRH9 671 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 CHST5Q9GZS9 411 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 GFOD1Q9NXC2 390 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 NKIRAS1Q9NYS0 192 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 FBXL7Q9UJT9 491 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 OR52A1Q9UKL2 312 aa9.01□□□□□ -0.97
HDAC8-217ENST00000478743 IGLV2-18A0A075B6J9 118 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 C13orf42A0A1B0GVH6 325 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 DHRS7CA6NNS2 312 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 H0YJX3 145 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 SDCBPO00560 298 aaPredicted RBP9□□□□□ -0.97
HDAC8-217ENST00000478743 DEGS1O15121 323 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 KDM4BO94953 1096 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 IL3RAP26951 378 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 MFAP2P55001 183 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 TCTAP57738 103 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 LINC00205P59089 165 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 MAGOHP61326 146 aaKnown RBP9□□□□□ -0.97
HDAC8-217ENST00000478743 PPP1R8Q12972 351 aaKnown RBP9□□□□□ -0.97
HDAC8-217ENST00000478743 PDZK1IP1Q13113 114 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 RPEL1Q2QD12 228 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 COQ5Q5HYK3 327 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 ZNF660Q6AZW8 331 aaPredicted RBP9□□□□□ -0.97
HDAC8-217ENST00000478743 TMEM61Q8N0U2 210 aa9□□□□□ -0.97
HDAC8-217ENST00000478743 TCEANCQ8N8B7 351 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms