RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 Q6ZTK2 550 aa21.84■■□□□ 1.09
CCM2-211ENST00000478582 PIP4P2Q8N4L2 257 aa21.84■■□□□ 1.09
CCM2-211ENST00000478582 OR13D1Q8NGV5 346 aa21.84■■□□□ 1.09
CCM2-211ENST00000478582 MRGPRDQ8TDS7 321 aa21.84■■□□□ 1.09
CCM2-211ENST00000478582 SLC25A46Q96AG3 418 aa21.84■■□□□ 1.09
CCM2-211ENST00000478582 CALYQ9NYX4 217 aa21.84■■□□□ 1.09
CCM2-211ENST00000478582 ABRACLQ9P1F3 81 aa21.84■■□□□ 1.09
CCM2-211ENST00000478582 ETV7Q9Y603 341 aa21.84■■□□□ 1.09
CCM2-211ENST00000478582 RAB27BO00194 218 aa21.83■■□□□ 1.09
CCM2-211ENST00000478582 ORC5O43913 435 aa21.83■■□□□ 1.09
CCM2-211ENST00000478582 PAHP00439 452 aa21.83■■□□□ 1.09
CCM2-211ENST00000478582 CDK2P24941 298 aa21.83■■□□□ 1.09
CCM2-211ENST00000478582 OR11H6Q8NGC7 330 aa21.83■■□□□ 1.09
CCM2-211ENST00000478582 OR10A7Q8NGE5 316 aa21.83■■□□□ 1.09
CCM2-211ENST00000478582 OR10R2Q8NGX6 335 aa21.83■■□□□ 1.09
CCM2-211ENST00000478582 LGALS14Q8TCE9 139 aa21.83■■□□□ 1.09
CCM2-211ENST00000478582 PECRQ9BY49 303 aa21.83■■□□□ 1.09
CCM2-211ENST00000478582 PRDM13Q9H4Q3 707 aa21.83■■□□□ 1.09
CCM2-211ENST00000478582 NPFFO15130 113 aa21.82■■□□□ 1.08
CCM2-211ENST00000478582 MIDNQ504T8 468 aa21.82■■□□□ 1.08
CCM2-211ENST00000478582 PLAC9Q5JTB6 97 aa21.82■■□□□ 1.08
CCM2-211ENST00000478582 PRAMEF5Q5TYX0 476 aa21.82■■□□□ 1.08
CCM2-211ENST00000478582 PNKDQ8N490 385 aa21.82■■□□□ 1.08
CCM2-211ENST00000478582 MRPL30Q8TCC3 161 aaKnown RBP21.82■■□□□ 1.08
CCM2-211ENST00000478582 CCDC107Q8WV48 283 aa21.82■■□□□ 1.08
CCM2-211ENST00000478582 ARHGAP5-AS1Q96IT6 56 aa21.82■■□□□ 1.08
CCM2-211ENST00000478582 TMEM133Q9H2Q1 129 aa21.82■■□□□ 1.08
CCM2-211ENST00000478582 MBNL3Q9NUK0 354 aaKnown RBP21.82■■□□□ 1.08
CCM2-211ENST00000478582 TRAPPC2LQ9UL33 140 aa21.82■■□□□ 1.08
CCM2-211ENST00000478582 SOX21Q9Y651 276 aaPredicted RBP21.82■■□□□ 1.08
CCM2-211ENST00000478582 TRAV39A0A0B4J263 110 aa21.81■■□□□ 1.08
CCM2-211ENST00000478582 GDNFP39905 211 aa21.81■■□□□ 1.08
CCM2-211ENST00000478582 MOGAT2Q3SYC2 334 aa21.81■■□□□ 1.08
CCM2-211ENST00000478582 TRAT1Q6PIZ9 186 aa21.81■■□□□ 1.08
CCM2-211ENST00000478582 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.81■■□□□ 1.08
CCM2-211ENST00000478582 OR4K15Q8NH41 348 aa21.81■■□□□ 1.08
CCM2-211ENST00000478582 RAB3CQ96E17 227 aa21.81■■□□□ 1.08
CCM2-211ENST00000478582 ZNF48Q96MX3 618 aaPredicted RBP21.81■■□□□ 1.08
CCM2-211ENST00000478582 BCL7BQ9BQE9 202 aa21.81■■□□□ 1.08
CCM2-211ENST00000478582 ATG5Q9H1Y0 275 aa21.81■■□□□ 1.08
CCM2-211ENST00000478582 RIMS4Q9H426 269 aaPredicted RBP21.81■■□□□ 1.08
CCM2-211ENST00000478582 IDI2-AS1Q9NZ38 188 aa21.81■■□□□ 1.08
CCM2-211ENST00000478582 SPATA2Q9UM82 520 aa21.81■■□□□ 1.08
CCM2-211ENST00000478582 FBN3Q75N90 2809 aa21.81■■□□□ 1.08
CCM2-211ENST00000478582 A0A087X0M5 115 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 A0A1B0GX30 115 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 POM121CA8CG34 1229 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 C15orf65H3BRN8 121 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 TRIM77I1YAP6 450 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 NAPSAO96009 420 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 OMGP23515 440 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 COX7A1P24310 79 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 CD34P28906 385 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 TMBIM6P55061 237 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 C6orf183Q5T699 404 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 ZNF554Q86TJ5 538 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 RTN4RL2Q86UN3 420 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 CLVS1Q8IUQ0 354 aaPredicted RBP21.8■■□□□ 1.08
CCM2-211ENST00000478582 OR5H6Q8NGV6 325 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 KIRREL1Q96J84 757 aa21.8■■□□□ 1.08
CCM2-211ENST00000478582 TRBV6-6A0A0A6YYG2 114 aa21.79■■□□□ 1.08
CCM2-211ENST00000478582 ODF3BA8MYP8 253 aa21.79■■□□□ 1.08
CCM2-211ENST00000478582 SCGNO76038 276 aa21.79■■□□□ 1.08
CCM2-211ENST00000478582 SSTR5P35346 364 aa21.79■■□□□ 1.08
CCM2-211ENST00000478582 DEFB112Q30KQ8 113 aa21.79■■□□□ 1.08
CCM2-211ENST00000478582 ZNF626Q68DY1 528 aa21.79■■□□□ 1.08
CCM2-211ENST00000478582 RAB2BQ8WUD1 216 aa21.79■■□□□ 1.08
CCM2-211ENST00000478582 ARL11Q969Q4 196 aa21.79■■□□□ 1.08
CCM2-211ENST00000478582 KCTD12Q96CX2 325 aaKnown RBP21.79■■□□□ 1.08
CCM2-211ENST00000478582 RAB9BQ9NP90 201 aa21.79■■□□□ 1.08
CCM2-211ENST00000478582 RHBDL2Q9NX52 303 aa21.79■■□□□ 1.08
CCM2-211ENST00000478582 AK3Q9UIJ7 227 aa21.79■■□□□ 1.08
CCM2-211ENST00000478582 KCNK7Q9Y2U2 307 aa21.79■■□□□ 1.08
CCM2-211ENST00000478582 IGHV2-26A0A0B4J1V2 119 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 A0A0U1RQK1 487 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 A0A1W2PRD5 423 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 A0A1W2PRF3 423 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 A0A1W2PRM7 423 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 SAA4P35542 130 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 ARL6IP1Q15041 203 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 KIAA2026Q5HYC2 2103 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 ZNF880Q6PDB4 577 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 SIGLECL1Q8N7X8 197 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 RFESDQ8TAC1 157 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 FAM216AQ8WUB2 273 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 CLEC7AQ9BXN2 247 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 DCSTAMPQ9H295 470 aa21.78■■□□□ 1.08
CCM2-211ENST00000478582 MEIOCA2RUB1 952 aa21.77■■□□□ 1.08
CCM2-211ENST00000478582 C12orf77C9JDV5 145 aa21.77■■□□□ 1.08
CCM2-211ENST00000478582 F2RL2O00254 374 aa21.77■■□□□ 1.08
CCM2-211ENST00000478582 MFNGO00587 321 aa21.77■■□□□ 1.08
CCM2-211ENST00000478582 HIST1H1DP16402 221 aaKnown RBP21.77■■□□□ 1.08
CCM2-211ENST00000478582 RCC1P18754 421 aaPredicted RBP21.77■■□□□ 1.08
CCM2-211ENST00000478582 DYNC1I2Q13409 638 aaKnown RBP21.77■■□□□ 1.08
CCM2-211ENST00000478582 BAIAP2L2Q6UXY1 529 aa21.77■■□□□ 1.08
CCM2-211ENST00000478582 RBMS3Q6XE24 437 aaKnown RBP21.77■■□□□ 1.08
CCM2-211ENST00000478582 ABHD12Q8N2K0 398 aa21.77■■□□□ 1.08
CCM2-211ENST00000478582 ZDHHC22Q8N966 263 aa21.77■■□□□ 1.08
CCM2-211ENST00000478582 OR52M1Q8NGK5 317 aa21.77■■□□□ 1.08
CCM2-211ENST00000478582 SLC25A38Q96DW6 304 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms