RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 SLC33A1O00400 549 aaPredicted RBP5.63□□□□□ -1.51
LDB3-206ENST00000477489 SDCBPO00560 298 aaPredicted RBP5.63□□□□□ -1.51
LDB3-206ENST00000477489 CDIPTO14735 213 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 RHBDL1O75783 438 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 OR2H2O95918 312 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 HAND1O96004 215 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 LYL1P12980 280 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 S100A1P23297 94 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 GLRA1P23415 457 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 S100A11P31949 105 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 ZNF81P51508 661 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 ZNF83P51522 516 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 ERVS71-1P61550 626 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 SUPT4H1P63272 117 aaKnown RBP5.63□□□□□ -1.51
LDB3-206ENST00000477489 SORDQ00796 357 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 TSC22D1Q15714 1073 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 TMEM30BQ3MIR4 351 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 LGALSLQ3ZCW2 172 aaPredicted RBP5.63□□□□□ -1.51
LDB3-206ENST00000477489 C11orf87Q6NUJ2 197 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 ACP7Q6ZNF0 438 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 RTN4RL2Q86UN3 420 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 LDLRAD3Q86YD5 345 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 C11orf53Q8IXP5 236 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 CMTM1Q8IZ96 169 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 LGI3Q8N145 548 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 RPRMLQ8N4K4 120 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 ZNF565Q8N9K5 539 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 RELL2Q8NC24 303 aaPredicted RBP5.63□□□□□ -1.51
LDB3-206ENST00000477489 ZBTB34Q8NCN2 500 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 ADAD2Q8NCV1 583 aaKnown RBP5.63□□□□□ -1.51
LDB3-206ENST00000477489 OR11H4Q8NGC9 324 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 THAP6Q8TBB0 222 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 Q8TCH9 128 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 RTN4IP1Q8WWV3 396 aaPredicted RBP5.63□□□□□ -1.51
LDB3-206ENST00000477489 IL22RA2Q969J5 263 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 MRPL24Q96A35 216 aaKnown RBP5.63□□□□□ -1.51
LDB3-206ENST00000477489 ABHD14BQ96IU4 210 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 C2orf50Q96LR7 162 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 HDHD3Q9BSH5 251 aaPredicted RBP5.63□□□□□ -1.51
LDB3-206ENST00000477489 FXYD6Q9H0Q3 95 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 OR51B6Q9H340 312 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 TMEM165Q9HC07 324 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 SLC2A9Q9NRM0 540 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 KCNIP1Q9NZI2 227 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 DNAJB11Q9UBS4 358 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 IL19Q9UHD0 177 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 TINAGQ9UJW2 476 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 TMED3Q9Y3Q3 217 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 DOPEY1Q5JWR5 2465 aa5.63□□□□□ -1.51
LDB3-206ENST00000477489 CHD3Q12873 2000 aaKnown RBP5.62□□□□□ -1.51
LDB3-206ENST00000477489 OOEPA6NGQ2 149 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 A6NLC8 198 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.62□□□□□ -1.51
LDB3-206ENST00000477489 ZNHIT1O43257 154 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 RP2O75695 350 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 CDS2O95674 445 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 FAM87AP0C7U9 286 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 TNFRSF1AP19438 455 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 PSMB6P28072 239 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 CHRNB4P30926 498 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 CCKARP32238 428 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 FABP6P51161 128 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 AP2S1P53680 142 aaPredicted RBP5.62□□□□□ -1.51
LDB3-206ENST00000477489 PIGPP57054 158 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 RIPPLY3P57055 190 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 FAM27E3Q08E93 113 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 TESK1Q15569 626 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 HMGN3Q15651 99 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 ALKBH6Q3KRA9 238 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 DCAF12L2Q5VW00 463 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 TEX261Q6UWH6 196 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 Q6ZR03 302 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 C17orf107Q6ZR85 190 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 ACOT7LQ6ZUV0 252 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 SLC51BQ86UW2 128 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 H1FOOQ8IZA3 346 aaPredicted RBP5.62□□□□□ -1.51
LDB3-206ENST00000477489 TCTEX1D1Q8N7M0 179 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 INO80EQ8NBZ0 244 aaPredicted RBP5.62□□□□□ -1.51
LDB3-206ENST00000477489 BVESQ8NE79 360 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 OR11L1Q8NGX0 322 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 OR10J5Q8NHC4 309 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 CASTOR1Q8WTX7 329 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 PHYHIPLQ96FC7 376 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 ELMOD3Q96FG2 381 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 LURAP1Q96LR2 239 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 SPIN2AQ99865 258 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 SPIN2BQ9BPZ2 258 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 C1QTNF6Q9BXI9 259 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 CHIAQ9BZP6 476 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 FAM234AQ9H0X4 552 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 DNTTIP1Q9H147 329 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 ESRP2Q9H6T0 727 aaKnown RBP5.62□□□□□ -1.51
LDB3-206ENST00000477489 FAM212BQ9NTI7 297 aaPredicted RBP5.62□□□□□ -1.51
LDB3-206ENST00000477489 COQ3Q9NZJ6 369 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 LUZP4Q9P127 313 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 TNFSF18Q9UNG2 199 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 OR2W1Q9Y3N9 320 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 MAB21L2Q9Y586 359 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 U3KQ87 197 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 SHANK1Q9Y566 2161 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms