RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 ZNRD1Q9P1U0 126 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 GHRLQ9UBU3 117 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 STUB1Q9UNE7 303 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 SESN1Q9Y6P5 492 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 V9GY05 133 aa7.88□□□□□ -1.15
HDAC3-208ENST00000476739 A0A0B4J203 849 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 TRAV1-2A0A0B4J238 106 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 LOC105371267A0A1B0GV96 52 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 hCG_1809904A0A1W2PP81 198 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 A0A1W2PPE2 198 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 A0A1W2PR64 198 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 A0A1W2PRV1 198 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 UBE2QL1A1L167 161 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 ODF3BA8MYP8 253 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 TRIM77I1YAP6 450 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 BPNT1O95861 308 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 IGHV4-59P01825 116 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 RBP4P02753 201 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 ARG1P05089 322 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 RNASE1P07998 156 aaKnown RBP7.87□□□□□ -1.15
HDAC3-208ENST00000476739 UBBP0CG47 229 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 CD36P16671 472 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 GALP22466 123 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 GADD45AP24522 165 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 CDK2P24941 298 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 FGF9P31371 208 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-208ENST00000476739 SSTR5P35346 364 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 TGFBR1P36897 503 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 IER3P46695 156 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 RPS27AP62979 156 aaKnown RBP7.87□□□□□ -1.15
HDAC3-208ENST00000476739 PAX5Q02548 391 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 RAB11BQ15907 218 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 SLC35E4Q6ICL7 350 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 RAB12Q6IQ22 244 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 FAM53AQ6NSI3 398 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-208ENST00000476739 C5orf24Q7Z6I8 188 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 LDLRAD3Q86YD5 345 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 OR51D1Q8NGF3 324 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 RFESDQ8TAC1 157 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 UBALD1Q8TB05 177 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 FAM216AQ8WUB2 273 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 CCDC107Q8WV48 283 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 CHCHD6Q9BRQ6 235 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 TM2D1Q9BX74 207 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 CHIAQ9BZP6 476 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 CST11Q9H112 138 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 LPAR5Q9H1C0 372 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 TMEM133Q9H2Q1 129 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 NCOR1P1Q9H4R4 102 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 SLA2Q9H6Q3 261 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 TAS2R3Q9NYW6 316 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 FAM96BQ9Y3D0 163 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 PEX16Q9Y5Y5 336 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 DNHD1Q96M86 4753 aa7.87□□□□□ -1.15
HDAC3-208ENST00000476739 IGHV2-26A0A0B4J1V2 119 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 KBTBD11-OT1A0A1B0GTJ5 212 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A10PA6NDY2 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A18PA6NE21 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A16PA6NEW6 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A20PA6NIJ5 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A8PA6NJQ4 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A7PA6NKC0 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 ZNF729A6NN14 1252 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A22PA8MWA6 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A12PA8MX19 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A5PA8MXJ8 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A23PA8MXZ1 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 CLDN34H7C241 214 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 LDLRAD4O15165 306 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 TSPAN9O75954 239 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 IGHV3-7P01780 117 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 MT-ND4P03905 459 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A15PP0C7V4 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A13PP0C7W8 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A14PP0C7W9 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM90A24PP0C7X0 464 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 SLC2A2P11168 524 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-208ENST00000476739 ARSBP15848 533 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 RAB3BP20337 219 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 KCNJ3P48549 501 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 TAGLNQ01995 201 aaKnown RBP7.86□□□□□ -1.15
HDAC3-208ENST00000476739 LTC4SQ16873 150 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 C2orf76Q3KRA6 126 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 MIDNQ504T8 468 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 NKAPLQ5M9Q1 402 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 ZNF626Q68DY1 528 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 HEPN1Q6WQI6 88 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 ZNF497Q6ZNH5 498 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 C6orf201Q7Z4U5 140 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 OR11H6Q8NGC7 330 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 OR13D1Q8NGV5 346 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 OR4K15Q8NH41 348 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 KCNG3Q8TAE7 436 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 NEK7Q8TDX7 302 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 LEAP2Q969E1 77 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 FAM3DQ96BQ1 224 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 KIRREL1Q96J84 757 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 SULT4A1Q9BR01 284 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 CENPOQ9BU64 300 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 TMEM59Q9BXS4 323 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms