RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 RTN4IP1Q8WWV3 396 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-219ENST00000476625 RNFT2Q96EX2 444 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 PRRG3Q9BZD7 231 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 RIBC2Q9H4K1 309 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 ZCCHC4Q9H5U6 513 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 LINC00574Q9H8X3 128 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 POMPQ9Y244 141 aa9.28□□□□□ -0.92
HDAC6-219ENST00000476625 A0A1W2PP11 408 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 E9PI62 339 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 J3QLW9 94 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 SDCBPO00560 298 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-219ENST00000476625 SAP30O75446 220 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 CDRT1O95170 752 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 ISG15P05161 165 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 HTR1AP08908 422 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 GP9P14770 177 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 ZNF19P17023 458 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 C21orf33P30042 268 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-219ENST00000476625 SATL1Q86VE3 508 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 SAXO1Q8IYX7 474 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 ZNF491Q8N8L2 437 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 ZNF565Q8N9K5 539 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 SUMF2Q8NBJ7 301 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 CCDC54Q8NEL0 328 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 OR10V1Q8NGI7 309 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 DNAJC9Q8WXX5 260 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 DLX4Q92988 240 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-219ENST00000476625 ST6GALNAC6Q969X2 333 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 NRBF2Q96F24 287 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 PELI1Q96FA3 418 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 RASL11BQ9BPW5 248 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 FAM192AQ9GZU8 254 aa9.27□□□□□ -0.93
HDAC6-219ENST00000476625 ISG20L2Q9H9L3 353 aaKnown RBP9.27□□□□□ -0.93
HDAC6-219ENST00000476625 G3V2T6 193 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 ATP6V0E1O15342 81 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 MPZL2O60487 215 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 HTR3BO95264 441 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 FAM107AO95990 144 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 MOSP00540 346 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 MT-ND2P03891 347 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 VHLP40337 213 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 MTNR1BP49286 362 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 ZNF134P52741 427 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 GABPB1Q06547 395 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-219ENST00000476625 TNFAIP8L1Q8WVP5 186 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 ARPC1AQ92747 370 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 ARL11Q969Q4 196 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 ORAI1Q96D31 301 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 C4orf36Q96KX1 117 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 CITED4Q96RK1 184 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 DPCDQ9BVM2 203 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-219ENST00000476625 EDA2RQ9HAV5 297 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 TAS2R4Q9NYW5 299 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 ZNF107Q9UII5 783 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-219ENST00000476625 FBXO7Q9Y3I1 522 aa9.26□□□□□ -0.93
HDAC6-219ENST00000476625 IGHV4OR15-8A0A075B7B6 117 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 A0A087WW49 117 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 DAPL1A0PJW8 107 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 J3QRE1 110 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 OVOL1O14753 267 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 SLC16A6O15403 523 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 SULT1B1O43704 296 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 SOX15O60248 233 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 PPIFP30405 207 aaKnown RBP9.25□□□□□ -0.93
HDAC6-219ENST00000476625 SOX6P35712 828 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 SOX2P48431 317 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 ZNF616Q08AN1 781 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 ALKBH1Q13686 389 aaKnown RBP9.25□□□□□ -0.93
HDAC6-219ENST00000476625 FDX2Q6P4F2 183 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 ZNF439Q8NDP4 499 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 RGP1Q92546 391 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-219ENST00000476625 PDCD1LG2Q9BQ51 273 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 BARHL1Q9BZE3 327 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 GABARAPL1Q9H0R8 117 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 PARP11Q9NR21 331 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 GFOD1Q9NXC2 390 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 KIAA1456Q9P272 454 aa9.25□□□□□ -0.93
HDAC6-219ENST00000476625 MAGEA13PA6NCF6 341 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 GEMIN2O14893 280 aaKnown RBP9.24□□□□□ -0.93
HDAC6-219ENST00000476625 RRP9O43818 475 aaKnown RBP9.24□□□□□ -0.93
HDAC6-219ENST00000476625 OR8U8P0C7N1 319 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 CD1BP29016 333 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 NDPQ00604 133 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 GNMTQ14749 295 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 ATP6AP1Q15904 470 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 FAM27D1Q5T7N8 215 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 ELP2Q6IA86 826 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 LHFPL3Q86UP9 236 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 PRR18Q8N4B5 295 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 OR1L1Q8NH94 360 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 SLC7A6OSQ96CW6 309 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-219ENST00000476625 GPER1Q99527 375 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 TM2D3Q9BRN9 247 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 GON7Q9BXV9 100 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 RETNQ9HD89 108 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 FAM118AQ9NWS6 357 aa9.24□□□□□ -0.93
HDAC6-219ENST00000476625 SAC3D1A6NKF1 404 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 OR7C1O76099 320 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-219ENST00000476625 IGLV1-40P01703 118 aa9.23□□□□□ -0.93
HDAC6-219ENST00000476625 IGHV3-11P01762 117 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms