RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 DNAJB11Q9UBS4 358 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 TNRC6AQ8NDV7 1962 aaKnown RBP13.67□□□□□ -0.22
VARS2-207ENST00000476162 ANKRD30BLA7E2S9 258 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 C21orf62-AS1Q17RA5 79 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 SPATA46Q5T0L3 261 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 DPPA2Q7Z7J5 298 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 KDF1Q8NAX2 398 aaPredicted RBP13.66□□□□□ -0.22
VARS2-207ENST00000476162 OR5L1Q8NGL2 311 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 NANOS1Q8WY41 292 aaKnown RBP13.66□□□□□ -0.22
VARS2-207ENST00000476162 A0A087X0M5 115 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 A0A1B0GX30 115 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 C7orf77A4D0Y5 90 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 S100A2P29034 98 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 HERV-K104P61576 105 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 OR2T2Q6IF00 324 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 P4HA3Q7Z4N8 544 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 S100PBPQ96BU1 408 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 ZNF488Q96MN9 340 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 SLC5A7Q9GZV3 580 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 GP6Q9HCN6 339 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 GAR1Q9NY12 217 aaKnown RBP13.66□□□□□ -0.22
VARS2-207ENST00000476162 TUBD1Q9UJT1 453 aa13.66□□□□□ -0.22
VARS2-207ENST00000476162 PRRC2CQ9Y520 2896 aaKnown RBP13.65□□□□□ -0.22
VARS2-207ENST00000476162 WISP2O76076 250 aa13.65□□□□□ -0.22
VARS2-207ENST00000476162 PPYP01298 95 aa13.65□□□□□ -0.22
VARS2-207ENST00000476162 WT1P19544 449 aaPredicted RBP13.65□□□□□ -0.22
VARS2-207ENST00000476162 UCP3P55916 312 aa13.65□□□□□ -0.22
VARS2-207ENST00000476162 PKIAP61925 76 aa13.65□□□□□ -0.22
VARS2-207ENST00000476162 CLINT1Q14677 625 aa13.65□□□□□ -0.22
VARS2-207ENST00000476162 TGIF2LXQ8IUE1 241 aa13.65□□□□□ -0.22
VARS2-207ENST00000476162 GCNT2Q8N0V5 402 aa13.65□□□□□ -0.22
VARS2-207ENST00000476162 GMPPAQ96IJ6 420 aaPredicted RBP13.65□□□□□ -0.22
VARS2-207ENST00000476162 ASCL3Q9NQ33 180 aa13.65□□□□□ -0.22
VARS2-207ENST00000476162 TP53TG5Q9Y2B4 290 aa13.65□□□□□ -0.22
VARS2-207ENST00000476162 MED12LQ86YW9 2145 aa13.65□□□□□ -0.22
VARS2-207ENST00000476162 A0A1W2PR80 420 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 C3orf80F5H4A9 247 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 FBXO24O75426 580 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 NAPSAO96009 420 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 HKR1P10072 659 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 CA6P23280 308 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 IGFBP7Q16270 282 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 MPV17LQ2QL34 196 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 DNLZQ5SXM8 178 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 LYZL2Q7Z4W2 148 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 MYPOPQ86VE0 399 aaPredicted RBP13.64□□□□□ -0.23
VARS2-207ENST00000476162 FAM24BQ8N5W8 94 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 NEK7Q8TDX7 302 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 AKR1E2Q96JD6 320 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 SYT3Q9BQG1 590 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 Q9N2K0 584 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 OR2S2Q9NQN1 319 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 MPC1Q9Y5U8 109 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 KPTNQ9Y664 436 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 DEDDO75618 318 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 SCGB1D2O95969 90 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 IFNA17P01571 189 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 SNRNP70P08621 437 aaKnown RBP13.64□□□□□ -0.23
VARS2-207ENST00000476162 CELA3BP08861 270 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 SCTP09683 121 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 PAX1P15863 534 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 CD80P33681 288 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 GNG3P63215 75 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 HMGN3Q15651 99 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 AWAT1Q58HT5 328 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 OR2A2Q6IF42 318 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 LIAT1Q6ZQX7 453 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 ZNF573Q86YE8 665 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 CA5BP1Q8WTZ4 195 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 KIRREL1Q96J84 757 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 SUCNR1Q9BXA5 334 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 PLSCR2Q9NRY7 297 aa13.64□□□□□ -0.23
VARS2-207ENST00000476162 LSM5Q9Y4Y9 91 aaKnown RBP13.64□□□□□ -0.23
VARS2-207ENST00000476162 OR5B21A6NL26 309 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 LRP3O75074 770 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 MAS1LP35410 378 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 TBC1D28Q2M2D7 210 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 CYB5R2Q6BCY4 276 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 Q6ZS49 121 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 MSI2Q96DH6 328 aaKnown RBP13.63□□□□□ -0.23
VARS2-207ENST00000476162 FAM86C1Q9NVL1 165 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 PHF1O43189 567 aaPredicted RBP13.63□□□□□ -0.23
VARS2-207ENST00000476162 IGHV1-2P23083 117 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 DVL1P1P54792 670 aaPredicted RBP13.63□□□□□ -0.23
VARS2-207ENST00000476162 GAMTQ14353 236 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 C17orf78Q8N4C9 275 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 LRTM2Q8N967 370 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 C18orf12Q96KH6 178 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 TRIB1Q96RU8 372 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 CBY1Q9Y3M2 126 aa13.63□□□□□ -0.23
VARS2-207ENST00000476162 K7EPK0 472 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 RHBDL1O75783 438 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 IGHG3P01860 377 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 DAOP14920 347 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 RPL12P30050 165 aaKnown RBP13.62□□□□□ -0.23
VARS2-207ENST00000476162 GNRHRP30968 328 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 SRSF7Q16629 238 aaKnown RBP eCLIP13.62□□□□□ -0.23
VARS2-207ENST00000476162 FAM71E2Q8N5Q1 922 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 CCDC71LQ8N9Z2 235 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 TP53RKQ96S44 253 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms