RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 TMEM269A0A1B0GVZ9 245 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 TMEM235A6NFC5 223 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 MFSD2BA6NFX1 497 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 C17orf100A8MU93 164 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 FAM25EA8MYX2 175 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 ZNF736B4DX44 427 aaPredicted RBP3.55□□□□□ -1.84
VPS13D-206ENST00000476045 PPIAL4DF5H284 164 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 MS4A18H0YCH9 400 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 SULT1C2O00338 296 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 TSPAN4O14817 238 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 LDLRAD4O15165 306 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 SRSF10O75494 262 aaKnown RBP3.55□□□□□ -1.84
VPS13D-206ENST00000476045 LY6HO94772 140 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 TPPPO94811 219 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 PMP2P02689 132 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 GRPP07492 148 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 NMBP08949 121 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 OR4E1P0C645 316 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 ZNF735P0CB33 412 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 PPIAL4FP0DN26 164 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 COX5BP10606 129 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 BTF3P20290 206 aaKnown RBP3.55□□□□□ -1.84
VPS13D-206ENST00000476045 BDKRB2P30411 391 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 APLNRP35414 380 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 GUCA1AP43080 201 aaPredicted RBP3.55□□□□□ -1.84
VPS13D-206ENST00000476045 PRKXP51817 358 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 ELLP55199 621 aaPredicted RBP3.55□□□□□ -1.84
VPS13D-206ENST00000476045 UCP3P55916 312 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 ACTBP60709 375 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 GMFBP60983 142 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 ACTG1P63261 375 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 BTN1A1Q13410 526 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 TAF13Q15543 124 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 MPPED2Q15777 294 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 HIST3H3Q16695 136 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 MS4A18Q3C1V0 323 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 KRTAP24-1Q3LI83 254 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 CDNFQ49AH0 187 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 LRRC37A5PQ49AS3 106 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 SLC22A6Q4U2R8 563 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 NHLRC3Q5JS37 347 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 FAM74A1Q5RGS3 127 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 ATPAF1Q5TC12 328 aaPredicted RBP3.55□□□□□ -1.84
VPS13D-206ENST00000476045 ZNF660Q6AZW8 331 aaPredicted RBP3.55□□□□□ -1.84
VPS13D-206ENST00000476045 CFAP161Q6P656 301 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 DNM1P34Q6PK57 102 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 GSG1LQ6UXU4 331 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 KCTD9Q7L273 389 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 RNF144BQ7Z419 303 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 PEG10Q86TG7 708 aaKnown RBP3.55□□□□□ -1.84
VPS13D-206ENST00000476045 COMMD2Q86X83 199 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 ZNF584Q8IVC4 421 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 CDH26Q8IXH8 852 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 PDZD9Q8IXQ8 264 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 GVQW1Q8N7I0 195 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 OR1M1Q8NGA1 313 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 OR4S1Q8NGB4 309 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 OR52N4Q8NGI2 321 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 OR4D6Q8NGJ1 314 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 OR6M1Q8NGM8 313 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 OR13C9Q8NGT0 318 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 SCARB1Q8WTV0 552 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 CASTOR1Q8WTX7 329 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 NUDCD2Q8WVJ2 157 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 ST8SIA4Q92187 359 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 THRSPQ92748 146 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 SPSB4Q96A44 273 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 TMEM186Q96B77 213 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 SLAMF6Q96DU3 332 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 MARS2Q96GW9 593 aaKnown RBP3.55□□□□□ -1.84
VPS13D-206ENST00000476045 SEC22AQ96IW7 307 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 CYYR1Q96J86 154 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 ZNF75AQ96N20 296 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 MICU1Q9BPX6 476 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 PDCD10Q9BUL8 212 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 SUCNR1Q9BXA5 334 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 MRPL37Q9BZE1 423 aaKnown RBP3.55□□□□□ -1.84
VPS13D-206ENST00000476045 EGLN1Q9GZT9 426 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 HEYLQ9NQ87 328 aaPredicted RBP3.55□□□□□ -1.84
VPS13D-206ENST00000476045 G6PC2Q9NQR9 355 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 OPN4Q9UHM6 478 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 HHLA2Q9UM44 414 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 VSIG4Q9Y279 399 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 POLR1DQ9Y2S0 133 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 NOP16Q9Y3C1 178 aaKnown RBP3.55□□□□□ -1.84
VPS13D-206ENST00000476045 SESN1Q9Y6P5 492 aa3.55□□□□□ -1.84
VPS13D-206ENST00000476045 IGHV1-69-2A0A0G2JMI3 117 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 C13orf42A0A1B0GVH6 325 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 RFPL4AA6NLU0 287 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 HMSDA8MTL9 139 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 RFPL4AL1F8VTS6 287 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 NUPL2O15504 423 aaKnown RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 PPIHO43447 177 aaKnown RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 SYT7O43581 403 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 CYB5AP00167 134 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 IGHV3-13P01766 116 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 RLN2P04090 185 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 CD55P08174 381 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 CST2P09228 141 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 MMP7P09237 267 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms