RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 ZNF701Q9NV72 531 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-217ENST00000475693 OR2AT4A6NND4 320 aa15.14■□□□□ 0.01
ATG4B-217ENST00000475693 M0QYG6 137 aa15.14■□□□□ 0.01
ATG4B-217ENST00000475693 GYPAP02724 150 aa15.14■□□□□ 0.01
ATG4B-217ENST00000475693 CSN2P05814 226 aa15.14■□□□□ 0.01
ATG4B-217ENST00000475693 GSTP1P09211 210 aaKnown RBP15.14■□□□□ 0.01
ATG4B-217ENST00000475693 RPA2P15927 270 aa15.14■□□□□ 0.01
ATG4B-217ENST00000475693 ATXN7L3Q14CW9 347 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-217ENST00000475693 TESK1Q15569 626 aa15.14■□□□□ 0.01
ATG4B-217ENST00000475693 TUSC1Q2TAM9 212 aa15.14■□□□□ 0.01
ATG4B-217ENST00000475693 TPRX1Q8N7U7 411 aa15.14■□□□□ 0.01
ATG4B-217ENST00000475693 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-217ENST00000475693 ZNRF1Q8ND25 227 aa15.14■□□□□ 0.01
ATG4B-217ENST00000475693 PLEKHF2Q9H8W4 249 aa15.14■□□□□ 0.01
ATG4B-217ENST00000475693 WIPI2Q9Y4P8 454 aa15.14■□□□□ 0.01
ATG4B-217ENST00000475693 ACAA1P09110 424 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-217ENST00000475693 VSIG10L2P0DP72 767 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 COL10A1Q03692 680 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 GSG1LQ6UXU4 331 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 OR4C16Q8NGL9 310 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 PLPPR1Q8TBJ4 325 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 CMSS1Q9BQ75 279 aaKnown RBP15.13■□□□□ 0.01
ATG4B-217ENST00000475693 PTPN13Q12923 2485 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 IGHV1-69-2A0A0G2JMI3 117 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 SH2D1BO14796 132 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 SCGNO76038 276 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 AKAIN1P0CW23 69 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 PRDX2P32119 198 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 CFHR2P36980 270 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 H2BFSP57053 126 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 MPV17LQ2QL34 196 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 SMIM21Q3B7S5 101 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 PAN3Q58A45 887 aaKnown RBP15.13■□□□□ 0.01
ATG4B-217ENST00000475693 DTX2Q86UW9 622 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 ZNF295-AS1Q8N0V1 137 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 BVESQ8NE79 360 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 Q8TCH9 128 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 NUDT16L1Q9BRJ7 211 aaKnown RBP15.13■□□□□ 0.01
ATG4B-217ENST00000475693 GINS4Q9BRT9 223 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 TMEM106BQ9NUM4 274 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 RCC2Q9P258 522 aaKnown RBP15.13■□□□□ 0.01
ATG4B-217ENST00000475693 HSF4Q9ULV5 492 aa15.13■□□□□ 0.01
ATG4B-217ENST00000475693 RAI1Q7Z5J4 1906 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-217ENST00000475693 TMEM82A0PJX8 343 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 ARPC5O15511 151 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 ATF4P18848 351 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-217ENST00000475693 IL13RA2Q14627 380 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 PDZD9Q8IXQ8 264 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 OR10Z1Q8NGY1 313 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 OR4K15Q8NH41 348 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 CCDC107Q8WV48 283 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 TINAGL1Q9GZM7 467 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-217ENST00000475693 ARL6Q9H0F7 186 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 DNTTIP1Q9H147 329 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 MYOZ1Q9NP98 299 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-217ENST00000475693 C12orf4Q9NQ89 552 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 TMEM178BH3BS89 294 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 IRF2P14316 349 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 COX6B1P14854 86 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 FAM189A2Q15884 450 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 C17orf107Q6ZR85 190 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 OR11L1Q8NGX0 322 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 UBALD1Q8TB05 177 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 CXorf58Q96LI9 332 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 CCL13Q99616 98 aa15.12■□□□□ 0.01
ATG4B-217ENST00000475693 SERPINE3A8MV23 424 aa15.11■□□□□ 0.01
ATG4B-217ENST00000475693 SULT1C2O00338 296 aa15.11■□□□□ 0.01
ATG4B-217ENST00000475693 PMP2P02689 132 aa15.11■□□□□ 0.01
ATG4B-217ENST00000475693 PPOXP50336 477 aa15.11■□□□□ 0.01
ATG4B-217ENST00000475693 SLC25A32Q9H2D1 315 aa15.11■□□□□ 0.01
ATG4B-217ENST00000475693 IFT46Q9NQC8 304 aa15.11■□□□□ 0.01
ATG4B-217ENST00000475693 KNG1P01042 644 aa15.11■□□□□ 0.01
ATG4B-217ENST00000475693 AESQ08117 197 aa15.11■□□□□ 0.01
ATG4B-217ENST00000475693 ZNF273Q14593 569 aa15.11■□□□□ 0.01
ATG4B-217ENST00000475693 PNLIPRP3Q17RR3 467 aa15.11■□□□□ 0.01
ATG4B-217ENST00000475693 SPIN3Q5JUX0 258 aa15.11■□□□□ 0.01
ATG4B-217ENST00000475693 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.11■□□□□ 0.01
ATG4B-217ENST00000475693 ZNF107Q9UII5 783 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A10PA6NDY2 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A18PA6NE21 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A16PA6NEW6 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A20PA6NIJ5 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A8PA6NJQ4 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A7PA6NKC0 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A22PA8MWA6 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A12PA8MX19 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A5PA8MXJ8 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A23PA8MXZ1 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 TSPAN4O14817 238 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 TSPAN9O75954 239 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A15PP0C7V4 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A13PP0C7W8 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A14PP0C7W9 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 FAM90A24PP0C7X0 464 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 RCC1P18754 421 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-217ENST00000475693 ACTBP60709 375 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 ACTG1P63261 375 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 MICBQ29980 383 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 AVPI1Q5T686 147 aa15.1■□□□□ 0.01
ATG4B-217ENST00000475693 ALKAL2Q6UX46 152 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms