RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 FCGR3BO75015 233 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 ZFPL1O95159 310 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 CCR2P41597 374 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 TTC32Q5I0X7 151 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 TGIF2LYQ8IUE0 185 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 MVB12AQ96EY5 273 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 MBNL1Q9NR56 388 aaKnown RBP10.17□□□□□ -0.78
U2AF1-209ENST00000475639 HS3ST3A1Q9Y663 406 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 CTAG2O75638 210 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 SNRPCP09234 159 aaKnown RBP10.17□□□□□ -0.78
U2AF1-209ENST00000475639 FAHP16930 419 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 CSRP1P21291 193 aaKnown RBP10.17□□□□□ -0.78
U2AF1-209ENST00000475639 ZNF766Q5HY98 468 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 RBPMS2Q6ZRY4 209 aaKnown RBP10.17□□□□□ -0.78
U2AF1-209ENST00000475639 OR10G4Q8NGN3 311 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 OR10G9Q8NGN4 311 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 OR10G7Q8NGN6 311 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 OR2I1PQ8NGU4 316 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 RPS4Y2Q8TD47 263 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 CLDN23Q96B33 292 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 ERRFI1Q9UJM3 462 aaPredicted RBP10.17□□□□□ -0.78
U2AF1-209ENST00000475639 BRCA2P51587 3418 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 IGSF23A1L1A6 192 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 CD1AP06126 327 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 SP1P08047 785 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 BSGP35613 385 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 FZD2Q14332 565 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 TRAT1Q6PIZ9 186 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 PDPNQ86YL7 162 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 RSG1Q9BU20 258 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 GPR61Q9BZJ8 451 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 TMEM140Q9NV12 185 aa10.17□□□□□ -0.78
U2AF1-209ENST00000475639 CEBPDP49716 269 aaPredicted RBP10.16□□□□□ -0.78
U2AF1-209ENST00000475639 RFESDQ8TAC1 157 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 FAHD2AQ96GK7 314 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 PLPPR2Q96GM1 343 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 PRSS27Q9BQR3 290 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 ESPL1Q14674 2120 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 COL4A3Q01955 1670 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 MSGN1A6NI15 193 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 ORM2P19652 201 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 LBX1P52954 281 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 AESQ08117 197 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 ZNF77Q15935 545 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 CEACAM16Q2WEN9 425 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 ZNF788Q6ZQV5 615 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 OR8I2Q8N0Y5 310 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 MS4A6EQ96DS6 147 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 MRPL13Q9BYD1 178 aaKnown RBP10.16□□□□□ -0.78
U2AF1-209ENST00000475639 TECRQ9NZ01 308 aaKnown RBP10.16□□□□□ -0.78
U2AF1-209ENST00000475639 TCFL5Q9UL49 500 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 A0A1W2PPC4 97 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 B4GALT1P15291 398 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 ZNF121P58317 390 aaPredicted RBP10.16□□□□□ -0.78
U2AF1-209ENST00000475639 PLP1P60201 277 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 NPEPL1Q8NDH3 523 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 OR6X1Q8NH79 312 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 KTI12Q96EK9 354 aaPredicted RBP10.16□□□□□ -0.78
U2AF1-209ENST00000475639 PERPQ96FX8 193 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 RNF126Q9BV68 326 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 TAAR3PQ9P1P4 343 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 ZNF391Q9UJN7 358 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 VSIG4Q9Y279 399 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 LOC107984156A0A0G2JMH3 177 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 SHISA7A6NL88 538 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 ZNF324O75467 553 aaPredicted RBP10.16□□□□□ -0.78
U2AF1-209ENST00000475639 P01737 135 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 CRHP06850 196 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 IZUMO4Q1ZYL8 232 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 ARL17AQ8IVW1 177 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 ADTRPQ96IZ2 230 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 HDAC8Q9BY41 377 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 NAT8Q9UHE5 227 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 PITPNC1Q9UKF7 332 aa10.16□□□□□ -0.78
U2AF1-209ENST00000475639 FCMRO60667 390 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 SMPD2O60906 423 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 CEACAM6P40199 344 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 PPP1R1AQ13522 171 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 IL13RA2Q14627 380 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 C19orf54Q5BKX5 351 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 COL5A1-AS1Q5SY13 56 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 GFI1BQ5VTD9 330 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 HEPN1Q6WQI6 88 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 MUC15Q8N387 334 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 AMER3Q8N944 861 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 ALG14Q96F25 216 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 POM121Q96HA1 1249 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 C1RLQ9NZP8 487 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 CBR3O75828 277 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 RPLP1P05386 114 aaKnown RBP10.15□□□□□ -0.78
U2AF1-209ENST00000475639 ZNF735P0CB33 412 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 EMP1P54849 157 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 FOXO1Q12778 655 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 METRNLQ641Q3 311 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 Q7L0L9 218 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 OR13H1Q8NG92 308 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 OR13G1Q8NGZ3 307 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 ZNF502Q8TBZ5 544 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 MCHR2Q969V1 340 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 RNF166Q96A37 237 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms