RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 RPL36A-HNRNPH2H7BZ11 118 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 EPPINO95925 133 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 CYB5R3P00387 301 aaPredicted RBP3.24□□□□□ -1.89
SMC5-203ENST00000475540 HLA-DQA1P01909 254 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 MAS1P04201 325 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 IFNA16P05015 189 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 OR56A5P0C7T3 313 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 IMPA1P29218 277 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 RPL12P30050 165 aaKnown RBP3.24□□□□□ -1.89
SMC5-203ENST00000475540 ADORA1P30542 326 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 AGTR1P30556 359 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 PPP1R2P41236 205 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 IDH3GP51553 393 aaPredicted RBP3.24□□□□□ -1.89
SMC5-203ENST00000475540 RNASE13Q5GAN3 156 aaKnown RBP3.24□□□□□ -1.89
SMC5-203ENST00000475540 NXNL2Q5VZ03 156 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 PPP1R2P3Q6NXS1 205 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 PRNTQ86SH4 94 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 ZFP82Q8N141 532 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 OR4C13Q8NGP0 309 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 C16orf78Q8WTQ4 265 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 TWIST2Q8WVJ9 160 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 TAMM41Q96BW9 452 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 NARS2Q96I59 477 aaKnown RBP3.24□□□□□ -1.89
SMC5-203ENST00000475540 OLFM3Q96PB7 478 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 RNF157Q96PX1 679 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 LINC01587Q99440 93 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 BCL2L14Q9BZR8 327 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 SLC2A9Q9NRM0 540 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 UBQLN4Q9NRR5 601 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 ZNF337Q9Y3M9 751 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 NOS1P29475 1434 aa3.24□□□□□ -1.89
SMC5-203ENST00000475540 CLUHO75153 1309 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 LOC102724200A0A096LPH7 203 aaPredicted RBP3.23□□□□□ -1.89
SMC5-203ENST00000475540 C5orf63A6NC05 138 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 SOD3P08294 240 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 LINC00614P0C842 121 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 LINC00869P0C866 280 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 HIST1H1EP10412 219 aaKnown RBP3.23□□□□□ -1.89
SMC5-203ENST00000475540 ME2P23368 584 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 KIR3DL2P43630 455 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 HSPA13P48723 471 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 LSM6P62312 80 aaKnown RBP3.23□□□□□ -1.89
SMC5-203ENST00000475540 AESQ08117 197 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 SKP2Q13309 424 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 PTPRKQ15262 1439 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 ELOCQ15369 112 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 LINC00303Q3SY05 128 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 TEX30Q5JUR7 227 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 SCGB1D4Q6XE38 83 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 NTM-AS1Q6ZSK4 140 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 CLEC20AQ6ZU45 233 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 STX12Q86Y82 276 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 ITPRIPQ8IWB1 547 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 ORMDL3Q8N138 153 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 OR1M1Q8NGA1 313 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 CDX2Q99626 313 aaPredicted RBP3.23□□□□□ -1.89
SMC5-203ENST00000475540 PRSS27Q9BQR3 290 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 CHCHD7Q9BUK0 85 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 TIPINQ9BVW5 301 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 MROQ9BYG7 248 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 VCX3BQ9H321 246 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 VSIRQ9H7M9 311 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 ENOPH1Q9UHY7 261 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 C14orf166Q9Y224 244 aaKnown RBP3.23□□□□□ -1.89
SMC5-203ENST00000475540 POMPQ9Y244 141 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 GPR179Q6PRD1 2367 aa3.23□□□□□ -1.89
SMC5-203ENST00000475540 TTC21AQ8NDW8 1320 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 SETD1AO15047 1707 aaKnown RBP3.22□□□□□ -1.89
SMC5-203ENST00000475540 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.22□□□□□ -1.89
SMC5-203ENST00000475540 TMEM223A0PJW6 202 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 M0QYV0 167 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 LGALS9O00182 355 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 TCF21O43680 179 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 KRT75O95678 551 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 TCRBP04435 133 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 MIPP30301 263 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 H2BFSP57053 126 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 ERVS71-1P61550 626 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 VBP1P61758 197 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 ARF6P62330 175 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 GLO1Q04760 184 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 FMODQ06828 376 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 TSPAN31Q12999 210 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 PPP1R1AQ13522 171 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 C1DQ13901 141 aaKnown RBP3.22□□□□□ -1.89
SMC5-203ENST00000475540 TTMPQ5BVD1 217 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 FAM173BQ6P4H8 233 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 ZNF773Q6PK81 442 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 FA2HQ7L5A8 372 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 PDPNQ86YL7 162 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 ZIC4Q8N9L1 334 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 OR5B17Q8NGF7 314 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 FAM57AQ8TBR7 257 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 CLDN23Q96B33 292 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 WFDC1Q9HC57 220 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 TAC3Q9UHF0 121 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 GLS2Q9UI32 602 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 ATPIF1Q9UII2 106 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 ALG5Q9Y673 324 aa3.22□□□□□ -1.89
SMC5-203ENST00000475540 IGLV3-12A0A075B6K2 115 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms