RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 TBL2Q9Y4P3 447 aaKnown RBP3.2□□□□□ -1.9
SDHB-205ENST00000475506 TICRRQ7Z2Z1 1910 aa3.2□□□□□ -1.9
SDHB-205ENST00000475506 LAMC3Q9Y6N6 1575 aa3.2□□□□□ -1.9
SDHB-205ENST00000475506 TTC21AQ8NDW8 1320 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 ADGRL3Q9HAR2 1447 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 LAMC1P11047 1609 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 TCHHQ07283 1943 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 IGHV2-26A0A0B4J1V2 119 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 A8MUU9 505 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 H3BQV1 296 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 K7EPK0 472 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 ISLRO14498 428 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 TCF21O43680 179 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 PSIP1O75475 530 aaKnown RBP3.19□□□□□ -1.9
SDHB-205ENST00000475506 CNMDO75829 334 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 ASS1P00966 412 aaKnown RBP3.19□□□□□ -1.9
SDHB-205ENST00000475506 APOEP02649 317 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 IL4P05112 153 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 NQO1P15559 274 aaKnown RBP3.19□□□□□ -1.9
SDHB-205ENST00000475506 ZNF32P17041 273 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 S100A5P33763 92 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 MPIP34949 423 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 KRTAP12-2P59991 146 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 C1QTNF8P60827 252 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 FAM3AP98173 230 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 C4orf26Q17RF5 130 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 SDHAF4Q5VUM1 108 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 NXNL2Q5VZ03 156 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 SLC25A34Q6PIV7 304 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 TBPL2Q6SJ96 375 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 DRAM2Q6UX65 266 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 CROCCP2Q86T23 111 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 MUC15Q8N387 334 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 SLC25A45Q8N413 288 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 ZFP62Q8NB50 900 aaPredicted RBP3.19□□□□□ -1.9
SDHB-205ENST00000475506 TWIST2Q8WVJ9 160 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 PPWD1Q96BP3 646 aaKnown RBP3.19□□□□□ -1.9
SDHB-205ENST00000475506 PRSS27Q9BQR3 290 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 POTEKPQ9BYX7 375 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 ULBP1Q9BZM6 244 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 PLEKHJ1Q9NW61 149 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 BTRCQ9Y297 605 aa3.19□□□□□ -1.9
SDHB-205ENST00000475506 EIF2AK4Q9P2K8 1649 aaKnown RBP3.19□□□□□ -1.9
SDHB-205ENST00000475506 DENND4BO75064 1496 aaPredicted RBP3.18□□□□□ -1.9
SDHB-205ENST00000475506 LRCOL1A6NCL2 159 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 IZUMO1RA6ND01 250 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 C16orf90A8MZG2 172 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 F5H5K5 113 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 GOLGA8MH3BSY2 632 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 SLC31A1O15431 190 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 MAGEB4O15481 346 aaPredicted RBP3.18□□□□□ -1.9
SDHB-205ENST00000475506 HLA-DMAP28067 261 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 PHBP35232 272 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 TGM4P49221 684 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 BLVRAP53004 296 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 DR1Q01658 176 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 MYL5Q02045 173 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 FUT5Q11128 374 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 ELP2Q6IA86 826 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 FAM151BQ6UXP7 276 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 C3orf62Q6ZUJ4 267 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 IFT20Q8IY31 132 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 C2orf73Q8N5S3 287 aaPredicted RBP3.18□□□□□ -1.9
SDHB-205ENST00000475506 TMEM156Q8N614 296 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 DNAJC9Q8WXX5 260 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 ANKRD36BP1Q96IX9 119 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 TIPINQ9BVW5 301 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 EBPLQ9BY08 206 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 ZNF717Q9BY31 904 aaPredicted RBP3.18□□□□□ -1.9
SDHB-205ENST00000475506 NKIRAS1Q9NYS0 192 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 IL20Q9NYY1 176 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 COMMD9Q9P000 198 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 RPL26L1Q9UNX3 145 aaKnown RBP3.18□□□□□ -1.9
SDHB-205ENST00000475506 POMPQ9Y244 141 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 SCN4AP35499 1836 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 SMARCA4P51532 1647 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 NUP160Q12769 1436 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 NPATQ14207 1427 aa3.18□□□□□ -1.9
SDHB-205ENST00000475506 ADGRL1O94910 1474 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 FANCD2Q9BXW9 1451 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 CDC42BPAQ5VT25 1732 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 IGLV4-60A0A075B6I1 120 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 IGLV3-12A0A075B6K2 115 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 SMIM31A0A1B0GVY4 71 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 TMEM150BA6NC51 233 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 RPL36A-HNRNPH2H7BZ11 118 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 PHYHO14832 338 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 TRAPPC3O43617 180 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 IGHV1-46P01743 117 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 ZNF286BP0CG31 522 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 SCGB1C2P0DMR2 95 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 CDC34P49427 236 aaPredicted RBP3.17□□□□□ -1.9
SDHB-205ENST00000475506 BASP1P80723 227 aaKnown RBP3.17□□□□□ -1.9
SDHB-205ENST00000475506 TBC1D28Q2M2D7 210 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 TMEM215Q68D42 235 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 FAM131AQ6UXB0 335 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 CASP12Q6UXS9 341 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 DAZ4Q86SG3 579 aaKnown RBP3.17□□□□□ -1.9
SDHB-205ENST00000475506 MMGT1Q8N4V1 131 aa3.17□□□□□ -1.9
SDHB-205ENST00000475506 SCGB1C1Q8TD33 95 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms