RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 TP53I3Q53FA7 332 aa9.81□□□□□ -0.84
SKA3-206ENST00000475251 RSBN1Q5VWQ0 802 aaPredicted RBP9.81□□□□□ -0.84
SKA3-206ENST00000475251 ZFAND6Q6FIF0 208 aa9.81□□□□□ -0.84
SKA3-206ENST00000475251 ELP2Q6IA86 826 aa9.81□□□□□ -0.84
SKA3-206ENST00000475251 LINC00311Q8N616 119 aa9.81□□□□□ -0.84
SKA3-206ENST00000475251 C8orf31Q8N9H6 132 aa9.81□□□□□ -0.84
SKA3-206ENST00000475251 OR52M1Q8NGK5 317 aa9.81□□□□□ -0.84
SKA3-206ENST00000475251 MYOZ3Q8TDC0 251 aa9.81□□□□□ -0.84
SKA3-206ENST00000475251 OR51J1Q9H342 316 aa9.81□□□□□ -0.84
SKA3-206ENST00000475251 ZCCHC4Q9H5U6 513 aa9.81□□□□□ -0.84
SKA3-206ENST00000475251 PLSCR3Q9NRY6 295 aa9.81□□□□□ -0.84
SKA3-206ENST00000475251 MYRFQ9Y2G1 1151 aa9.81□□□□□ -0.84
SKA3-206ENST00000475251 TRAV24A0A0B4J272 114 aa9.8□□□□□ -0.84
SKA3-206ENST00000475251 A0A1W2PPE3 182 aa9.8□□□□□ -0.84
SKA3-206ENST00000475251 GABPB1Q06547 395 aaPredicted RBP9.8□□□□□ -0.84
SKA3-206ENST00000475251 FLOT2Q14254 428 aa9.8□□□□□ -0.84
SKA3-206ENST00000475251 KISS1Q15726 138 aa9.8□□□□□ -0.84
SKA3-206ENST00000475251 Q3ZCU0 254 aa9.8□□□□□ -0.84
SKA3-206ENST00000475251 LCE2CQ5TA81 110 aa9.8□□□□□ -0.84
SKA3-206ENST00000475251 FDX2Q6P4F2 183 aa9.8□□□□□ -0.84
SKA3-206ENST00000475251 FAM71E2Q8N5Q1 922 aa9.8□□□□□ -0.84
SKA3-206ENST00000475251 PXT1Q8NFP0 134 aa9.8□□□□□ -0.84
SKA3-206ENST00000475251 OR5D14Q8NGL3 314 aa9.8□□□□□ -0.84
SKA3-206ENST00000475251 RTN4IP1Q8WWV3 396 aaPredicted RBP9.8□□□□□ -0.84
SKA3-206ENST00000475251 NR1H4Q96RI1 486 aaPredicted RBP9.8□□□□□ -0.84
SKA3-206ENST00000475251 MYCBPQ99417 103 aaPredicted RBP9.8□□□□□ -0.84
SKA3-206ENST00000475251 HSPB9Q9BQS6 159 aa9.8□□□□□ -0.84
SKA3-206ENST00000475251 THTPAQ9BU02 230 aa9.8□□□□□ -0.84
SKA3-206ENST00000475251 GAR1Q9NY12 217 aaKnown RBP9.8□□□□□ -0.84
SKA3-206ENST00000475251 FRRS1LQ9P0K9 344 aa9.8□□□□□ -0.84
SKA3-206ENST00000475251 ZNF107Q9UII5 783 aaPredicted RBP9.8□□□□□ -0.84
SKA3-206ENST00000475251 I3L521 148 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 SDCBPO00560 298 aaPredicted RBP9.79□□□□□ -0.84
SKA3-206ENST00000475251 LDLRAD4O15165 306 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 MAGEB3O15480 346 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 SULT1B1O43704 296 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 HTR1AP08908 422 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 SPNP16150 400 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 ZNF85Q03923 595 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 ZNF691Q5VV52 312 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 SERPINA12Q8IW75 414 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 ZNF491Q8N8L2 437 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 TMEM104Q8NE00 496 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 OR8J1Q8NGP2 316 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 DCUN1D4Q92564 292 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 TM2D3Q9BRN9 247 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 GNB4Q9HAV0 340 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 RAB9BQ9NP90 201 aa9.79□□□□□ -0.84
SKA3-206ENST00000475251 DNAH1Q9P2D7 4330 aa9.78□□□□□ -0.84
SKA3-206ENST00000475251 SORL1Q92673 2214 aa9.78□□□□□ -0.84
SKA3-206ENST00000475251 TMEM30CPA0ZSE6 113 aa9.78□□□□□ -0.84
SKA3-206ENST00000475251 G3V2T6 193 aa9.78□□□□□ -0.84
SKA3-206ENST00000475251 JTBO76095 146 aa9.78□□□□□ -0.84
SKA3-206ENST00000475251 EPHA2P29317 976 aa9.78□□□□□ -0.84
SKA3-206ENST00000475251 VEGFCP49767 419 aa9.78□□□□□ -0.84
SKA3-206ENST00000475251 GNGT1P63211 74 aa9.78□□□□□ -0.84
SKA3-206ENST00000475251 GALEQ14376 348 aa9.78□□□□□ -0.84
SKA3-206ENST00000475251 ASPHD1Q5U4P2 390 aa9.78□□□□□ -0.84
SKA3-206ENST00000475251 PLPPR1Q8TBJ4 325 aa9.78□□□□□ -0.84
SKA3-206ENST00000475251 MRPL48Q96GC5 212 aaKnown RBP9.78□□□□□ -0.84
SKA3-206ENST00000475251 GPER1Q99527 375 aa9.78□□□□□ -0.84
SKA3-206ENST00000475251 DPCDQ9BVM2 203 aaPredicted RBP9.78□□□□□ -0.84
SKA3-206ENST00000475251 ERGIC3Q9Y282 383 aa9.78□□□□□ -0.84
SKA3-206ENST00000475251 MRPS28Q9Y2Q9 187 aaKnown RBP9.78□□□□□ -0.84
SKA3-206ENST00000475251 TCRBV3S1A0A5B6 114 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 DAPL1A0PJW8 107 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 SLC16A6O15403 523 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 ORC5O43913 435 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 MITFO75030 526 aaPredicted RBP9.77□□□□□ -0.85
SKA3-206ENST00000475251 OR8U9P0C7N5 309 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 PPIFP30405 207 aaKnown RBP9.77□□□□□ -0.85
SKA3-206ENST00000475251 NANOS3P60323 173 aaKnown RBP9.77□□□□□ -0.85
SKA3-206ENST00000475251 GNB1P62873 340 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 RSU1Q15404 277 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 TMEM30BQ3MIR4 351 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 KDM4DQ6B0I6 523 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 LYPD6Q86Y78 171 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 ZDHHC13Q8IUH4 622 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 OR51A4Q8NGJ6 313 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 ARL11Q969Q4 196 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 ST6GALNAC6Q969X2 333 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 EME1Q96AY2 570 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 OR5B12Q96R08 314 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 OR4C12Q96R67 309 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 LYSTQ99698 3801 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 FAM192AQ9GZU8 254 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 IFT22Q9H7X7 185 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 EDA2RQ9HAV5 297 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 GFOD1Q9NXC2 390 aa9.77□□□□□ -0.85
SKA3-206ENST00000475251 A8MZ25 164 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 LINC01619G3V211 115 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 IGLV1-40P01703 118 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 CSTBP04080 98 aaKnown RBP9.76□□□□□ -0.85
SKA3-206ENST00000475251 SLC2A2P11168 524 aaPredicted RBP9.76□□□□□ -0.85
SKA3-206ENST00000475251 RAB9AP51151 201 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 ZNF137PP52743 207 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 F2RL1P55085 397 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 PITPNAQ00169 270 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 ALKBH1Q13686 389 aaKnown RBP9.76□□□□□ -0.85
SKA3-206ENST00000475251 KIAA0141Q14154 515 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms