RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 VENTXO95231 258 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 CDK2P24941 298 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 SAA4P35542 130 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 TGFBR1P36897 503 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 PLAC9Q5JTB6 97 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 Q6YL49 198 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 Q6ZPA2 131 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 C6orf201Q7Z4U5 140 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 TRAPPC6BQ86SZ2 158 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 RTN4RL2Q86UN3 420 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 TMEM86BQ8N661 226 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 SIGLECL1Q8N7X8 197 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 JMJD8Q96S16 334 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 FAAP24Q9BTP7 215 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 MEGF9Q9H1U4 602 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.77□□□□□ -0.21
SCAF11-206ENST00000474828 DAPK2Q9UIK4 370 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 KCNK7Q9Y2U2 307 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 ETV7Q9Y603 341 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 IGHV2-26A0A0B4J1V2 119 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 A0A0B4J203 849 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 SMIM30A4D0T7 59 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 RPL5P46777 297 aaKnown RBP13.76□□□□□ -0.21
SCAF11-206ENST00000474828 VEGFCP49767 419 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 PRB3Q04118 309 aaPredicted RBP13.76□□□□□ -0.21
SCAF11-206ENST00000474828 MXD1Q05195 221 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 AANATQ16613 207 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 TMEM30BQ3MIR4 351 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 Q3ZCU0 254 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 LDLRAD2Q5SZI1 272 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 TRAT1Q6PIZ9 186 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 ZNF782Q6ZMW2 699 aaPredicted RBP13.76□□□□□ -0.21
SCAF11-206ENST00000474828 PNKDQ8N490 385 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 C8orf31Q8N9H6 132 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 BEND2Q8NDZ0 799 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 ZNF596Q8TC21 504 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 SLC25A46Q96AG3 418 aa13.76□□□□□ -0.21
SCAF11-206ENST00000474828 RIMS4Q9H426 269 aaPredicted RBP13.76□□□□□ -0.21
SCAF11-206ENST00000474828 ZMAT3Q9HA38 289 aaKnown RBP13.76□□□□□ -0.21
SCAF11-206ENST00000474828 TBL2Q9Y4P3 447 aaKnown RBP13.76□□□□□ -0.21
SCAF11-206ENST00000474828 C12orf77C9JDV5 145 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 MFNGO00587 321 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 SSTR5P35346 364 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 GLP1RP43220 463 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 LOXL3P58215 753 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 NCS1P62166 190 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 DYNC1I2Q13409 638 aaKnown RBP13.75□□□□□ -0.21
SCAF11-206ENST00000474828 MOGAT2Q3SYC2 334 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 MINOS1Q5TGZ0 78 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 PRAMEF5Q5TYX0 476 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 Q6ZTK2 550 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 PDZD9Q8IXQ8 264 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 OR10R2Q8NGX6 335 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 MRGPRDQ8TDS7 321 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 NEK7Q8TDX7 302 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 ARHGAP5-AS1Q96IT6 56 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 BCL7BQ9BQE9 202 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 CLEC7AQ9BXN2 247 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 PECRQ9BY49 303 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 NAA50Q9GZZ1 169 aaKnown RBP13.75□□□□□ -0.21
SCAF11-206ENST00000474828 PLEKHJ1Q9NW61 149 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 IDI2-AS1Q9NZ38 188 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 ABRACLQ9P1F3 81 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 ZNRD1Q9P1U0 126 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 MINOS1-NBL1R4GNA1 71 aa13.75□□□□□ -0.21
SCAF11-206ENST00000474828 UBE2QL1A1L167 161 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 METTL21EPA6NDL7 271 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 VGLL3A8MV65 326 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 PAHP00439 452 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 MELTFP08582 738 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 FBP1P09467 338 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 RCC1P18754 421 aaPredicted RBP13.74□□□□□ -0.21
SCAF11-206ENST00000474828 OMGP23515 440 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 LY6G6FQ5SQ64 297 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 C6orf183Q5T699 404 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 BAIAP2L2Q6UXY1 529 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 GPR141Q7Z602 305 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 OR4P4Q8NGL7 312 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 SPATA3Q8NHX4 192 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 LGALS14Q8TCE9 139 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 KCTD12Q96CX2 325 aaKnown RBP13.74□□□□□ -0.21
SCAF11-206ENST00000474828 SLC25A38Q96DW6 304 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 ZNF286AQ9HBT8 521 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 ING3Q9NXR8 418 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 SPATA2Q9UM82 520 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 POMT1Q9Y6A1 747 aa13.74□□□□□ -0.21
SCAF11-206ENST00000474828 A0A0A6YYH2 397 aa13.73□□□□□ -0.21
SCAF11-206ENST00000474828 TRAV39A0A0B4J263 110 aa13.73□□□□□ -0.21
SCAF11-206ENST00000474828 MDFIC2A0A1B0GVS7 189 aa13.73□□□□□ -0.21
SCAF11-206ENST00000474828 MEIOCA2RUB1 952 aa13.73□□□□□ -0.21
SCAF11-206ENST00000474828 A6NJ64 397 aa13.73□□□□□ -0.21
SCAF11-206ENST00000474828 LY6LH3BQJ8 138 aa13.73□□□□□ -0.21
SCAF11-206ENST00000474828 SCGNO76038 276 aa13.73□□□□□ -0.21
SCAF11-206ENST00000474828 SNRPBP14678 240 aaKnown RBP13.73□□□□□ -0.21
SCAF11-206ENST00000474828 HIST1H1DP16402 221 aaKnown RBP13.73□□□□□ -0.21
SCAF11-206ENST00000474828 IER3P46695 156 aa13.73□□□□□ -0.21
SCAF11-206ENST00000474828 VBP1P61758 197 aa13.73□□□□□ -0.21
SCAF11-206ENST00000474828 LSM3P62310 102 aaKnown RBP13.73□□□□□ -0.21
SCAF11-206ENST00000474828 ARL6IP1Q15041 203 aa13.73□□□□□ -0.21
SCAF11-206ENST00000474828 SLC9A3R2Q15599 337 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms