RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 PITX3O75364 302 aa18.23■□□□□ 0.51
SH3D21-202ENST00000474766 DIRAS3O95661 229 aa18.23■□□□□ 0.51
SH3D21-202ENST00000474766 EWSR1Q01844 656 aaKnown RBP eCLIP18.23■□□□□ 0.512e-7■■■□□ 16
SH3D21-202ENST00000474766 SSX2Q16385 188 aa18.23■□□□□ 0.51
SH3D21-202ENST00000474766 TBR1Q16650 682 aa18.23■□□□□ 0.51
SH3D21-202ENST00000474766 ABCA11PQ4W5N1 156 aa18.23■□□□□ 0.51
SH3D21-202ENST00000474766 ZNF343Q6P1L6 599 aa18.23■□□□□ 0.51
SH3D21-202ENST00000474766 OR5D18Q8NGL1 313 aa18.23■□□□□ 0.51
SH3D21-202ENST00000474766 OR2G3Q8NGZ4 309 aa18.23■□□□□ 0.51
SH3D21-202ENST00000474766 OR14L1PQ8NHC6 308 aa18.23■□□□□ 0.51
SH3D21-202ENST00000474766 RTN4IP1Q8WWV3 396 aaPredicted RBP18.23■□□□□ 0.51
SH3D21-202ENST00000474766 RBMXL1Q96E39 390 aaKnown RBP18.23■□□□□ 0.51
SH3D21-202ENST00000474766 SYT3Q9BQG1 590 aa18.23■□□□□ 0.51
SH3D21-202ENST00000474766 IGSF10Q6WRI0 2623 aa18.23■□□□□ 0.51
SH3D21-202ENST00000474766 MYO7BQ6PIF6 2116 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 CYB5BO43169 146 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 HSPA12AO43301 675 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 SCAF4O95104 1147 aaKnown RBP18.22■□□□□ 0.51
SH3D21-202ENST00000474766 TRGC2P03986 189 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 P04436 131 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 CCL20P78556 96 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 OR2T2Q6IF00 324 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 LYZL2Q7Z4W2 148 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 GGNQ86UU5 652 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 FBXL14Q8N1E6 418 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 OR4D5Q8NGN0 318 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 NPRL2Q8WTW4 380 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 C11orf1Q9H5F2 150 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 RCL1Q9Y2P8 373 aaKnown RBP18.22■□□□□ 0.51
SH3D21-202ENST00000474766 TGIF2-C20orf24A0A0A6YYL0 155 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 FCGR2AP12318 317 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 DTYMKP23919 212 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 NTF4P34130 210 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 DPPA3Q6W0C5 159 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 YRDCQ86U90 279 aaKnown RBP18.22■□□□□ 0.51
SH3D21-202ENST00000474766 GPR137CQ8N3F9 429 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 MSI2Q96DH6 328 aaKnown RBP18.22■□□□□ 0.51
SH3D21-202ENST00000474766 TMEM68Q96MH6 324 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 SSX3Q99909 188 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 TP53TG5Q9Y2B4 290 aa18.22■□□□□ 0.51
SH3D21-202ENST00000474766 ZNF716A6NP11 495 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 ATP6V0CP27449 155 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 RND2P52198 227 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 FOXO1Q12778 655 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 ICAM4Q14773 271 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 RAB35Q15286 201 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 SNAI3Q3KNW1 292 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 OR2C3Q8N628 320 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 OR10AD1Q8NGE0 317 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 PLEKHJ1Q9NW61 149 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 AK3Q9UIJ7 227 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 WSB1Q9Y6I7 421 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 BOD1L1Q8NFC6 3051 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 CNTRLQ7Z7A1 2325 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 CHD6Q8TD26 2715 aa18.21■□□□□ 0.51
SH3D21-202ENST00000474766 PIEZO2Q9H5I5 2752 aa18.21■□□□□ 0.5
SH3D21-202ENST00000474766 H0YL77 283 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 SYNGR3O43761 229 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 HBE1P02100 147 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 CST2P09228 141 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 TRGC1P0CF51 173 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 CARD18P57730 90 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 HAGHQ16775 308 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 PCSK4Q6UW60 755 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 C1orf87Q8N0U7 546 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 ABHD14BQ96IU4 210 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 LRRC3CA6NJW4 275 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 ZNF732B4DXR9 585 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 CDS2O95674 445 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 TMEM225BP0DP42 221 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 NDUFB7P17568 137 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 UCP3P55916 312 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 GFI1BQ5VTD9 330 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 OR52M1Q8NGK5 317 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 RNASEH2CQ8TDP1 164 aaKnown RBP18.2■□□□□ 0.5
SH3D21-202ENST00000474766 GNPNAT1Q96EK6 184 aaPredicted RBP18.2■□□□□ 0.5
SH3D21-202ENST00000474766 ADGRG7Q96K78 797 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 FAM210BQ96KR6 192 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 NOL4LQ96MY1 436 aaPredicted RBP18.2■□□□□ 0.5
SH3D21-202ENST00000474766 TMEM38BQ9NVV0 291 aa18.2■□□□□ 0.5
SH3D21-202ENST00000474766 A0A1B0GV50 99 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 SMCO3A2RU48 225 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 DVL1O14640 695 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 RFPL3SP0C7P2 107 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 FABP4P15090 132 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 HLA-DRB3P79483 266 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 PNRC1Q12796 327 aaPredicted RBP18.19■□□□□ 0.5
SH3D21-202ENST00000474766 KRTAP27-1Q3LI81 207 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 SP6Q3SY56 376 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 C6orf201Q7Z4U5 140 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 DMRTC2Q8IXT2 367 aaPredicted RBP18.19■□□□□ 0.5
SH3D21-202ENST00000474766 CPT1CQ8TCG5 803 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 ABHD5Q8WTS1 349 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 RAB24Q969Q5 203 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 LURAP1Q96LR2 239 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 Q96M66 194 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 PACRGQ96M98 296 aaPredicted RBP18.19■□□□□ 0.5
SH3D21-202ENST00000474766 SLC25A31Q9H0C2 315 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 CRLF2Q9HC73 371 aa18.19■□□□□ 0.5
SH3D21-202ENST00000474766 PITPNC1Q9UKF7 332 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms