RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 SLC22A6Q4U2R8 563 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 ZNF497Q6ZNH5 498 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 LINC00596Q86U02 117 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 DRAM1Q8N682 238 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 OR56B4Q8NH76 319 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 CAPSLQ8WWF8 208 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 MUL1Q969V5 352 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 RPEQ96AT9 228 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 DERL3Q96Q80 235 aa14.75□□□□□ -0.05
COL7A1-209ENST00000474432 CHCHD3Q9NX63 227 aaKnown RBP14.75□□□□□ -0.05
COL7A1-209ENST00000474432 PNMA8CA0A1B0GUJ8 204 aa14.74□□□□□ -0.05
COL7A1-209ENST00000474432 TMEM30CPA0ZSE6 113 aa14.74□□□□□ -0.05
COL7A1-209ENST00000474432 H3BUI4 141 aa14.74□□□□□ -0.05
COL7A1-209ENST00000474432 ZNF780AO75290 641 aaPredicted RBP14.74□□□□□ -0.05
COL7A1-209ENST00000474432 CD1AP06126 327 aa14.74□□□□□ -0.05
COL7A1-209ENST00000474432 GZMHP20718 246 aa14.74□□□□□ -0.05
COL7A1-209ENST00000474432 LOXL3P58215 753 aa14.74□□□□□ -0.05
COL7A1-209ENST00000474432 MADCAM1Q13477 382 aa14.74□□□□□ -0.05
COL7A1-209ENST00000474432 CENPVQ7Z7K6 275 aaPredicted RBP14.74□□□□□ -0.05
COL7A1-209ENST00000474432 C8orf59Q8N0T1 100 aaPredicted RBP14.74□□□□□ -0.05
COL7A1-209ENST00000474432 WFDC9Q8NEX5 89 aa14.74□□□□□ -0.05
COL7A1-209ENST00000474432 OR4F17Q8NGA8 305 aa14.74□□□□□ -0.05
COL7A1-209ENST00000474432 UBALD1Q8TB05 177 aa14.74□□□□□ -0.05
COL7A1-209ENST00000474432 OR4F4Q96R69 305 aa14.74□□□□□ -0.05
COL7A1-209ENST00000474432 PAK1IP1Q9NWT1 392 aaPredicted RBP14.74□□□□□ -0.05
COL7A1-209ENST00000474432 AMMECR1Q9Y4X0 333 aaPredicted RBP14.74□□□□□ -0.05
COL7A1-209ENST00000474432 A0A1W2PRX2 142 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 FAM106CPP0CH98 169 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 GTF2F2P13984 249 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 GP2P55259 537 aaKnown RBP14.73□□□□□ -0.05
COL7A1-209ENST00000474432 MED21Q13503 144 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 ATAD3CQ5T2N8 411 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 GLIPR1L1Q6UWM5 242 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 AHSA2Q719I0 299 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 GAPTQ8N292 157 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 NANOGP1Q8N7R0 232 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 OR52M1Q8NGK5 317 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 CCDC107Q8WV48 283 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 MYDGFQ969H8 173 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 PCDHB16Q9NRJ7 776 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 MRPS28Q9Y2Q9 187 aaKnown RBP14.73□□□□□ -0.05
COL7A1-209ENST00000474432 MOB4Q9Y3A3 225 aa14.73□□□□□ -0.05
COL7A1-209ENST00000474432 ANKRD65E5RJM6 399 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 ORC5O43913 435 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 CELP19835 753 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 RAB7AP51149 207 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 WNT4P56705 351 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 TAS2R43P59537 309 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 EBI3Q14213 229 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 SIGIRRQ6IA17 410 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 CDH26Q8IXH8 852 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 OR8H3Q8N146 312 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 LINC00311Q8N616 119 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 C5orf56Q8N8D9 126 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 TMEM104Q8NE00 496 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 BPIFB6Q8NFQ5 453 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 TFAP2CQ92754 450 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 ARL11Q969Q4 196 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 ST6GALNAC6Q969X2 333 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 S100A13Q99584 98 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 GFOD1Q9NXC2 390 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 CKLFQ9UBR5 152 aa14.72□□□□□ -0.05
COL7A1-209ENST00000474432 M0QZK8 103 aa14.71□□□□□ -0.05
COL7A1-209ENST00000474432 MAS1P04201 325 aa14.71□□□□□ -0.05
COL7A1-209ENST00000474432 ZNF816Q0VGE8 651 aaPredicted RBP14.71□□□□□ -0.05
COL7A1-209ENST00000474432 GPR176Q14439 515 aa14.71□□□□□ -0.05
COL7A1-209ENST00000474432 INSL4Q14641 139 aa14.71□□□□□ -0.05
COL7A1-209ENST00000474432 Q6ZPA2 131 aa14.71□□□□□ -0.05
COL7A1-209ENST00000474432 JAGN1Q8N5M9 183 aa14.71□□□□□ -0.05
COL7A1-209ENST00000474432 C8orf31Q8N9H6 132 aa14.71□□□□□ -0.05
COL7A1-209ENST00000474432 MRPS24Q96EL2 167 aaKnown RBP14.71□□□□□ -0.05
COL7A1-209ENST00000474432 BANF2Q9H503 90 aa14.71□□□□□ -0.05
COL7A1-209ENST00000474432 IGHV3-43A0A0B4J1X8 118 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 TCRBV4S1A1TA0A5B7 111 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 C12orf77C9JDV5 145 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 HSD17B6O14756 317 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 SLC31A2O15432 143 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 IGKV1D-33P01593 117 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 IGKV1-33P01594 117 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 IGHV3-43DP0DP04 118 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 VHLP40337 213 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 HNF4GQ14541 408 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 C9orf152Q5JTZ5 239 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 UNQ9370/PRO34162Q6UXP9 181 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 STX19Q8N4C7 294 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 Q8N6K4 173 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 ZNF439Q8NDP4 499 aa14.7□□□□□ -0.06
COL7A1-209ENST00000474432 NKX1-2Q9UD57 310 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-209ENST00000474432 TSSC4Q9Y5U2 329 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-209ENST00000474432 IGHV1-3A0A0C4DH29 117 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 AIPO00170 330 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 SDCBPO00560 298 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-209ENST00000474432 FGF16O43320 207 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 SC5DO75845 299 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 TMEM11P17152 192 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 REG1BP48304 166 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 ZNF134P52741 427 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 RNLSQ5VYX0 342 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 RAB12Q6IQ22 244 aa14.69□□□□□ -0.06
COL7A1-209ENST00000474432 C5orf24Q7Z6I8 188 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms