RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 TMEM106BQ9NUM4 274 aa1.28□□□□□ -2.2
SSB-210ENST00000474273 PLEKHJ1Q9NW61 149 aa1.28□□□□□ -2.2
SSB-210ENST00000474273 NKIRAS1Q9NYS0 192 aa1.28□□□□□ -2.2
SSB-210ENST00000474273 CFL2Q9Y281 166 aa1.28□□□□□ -2.2
SSB-210ENST00000474273 AP3M1Q9Y2T2 418 aa1.28□□□□□ -2.2
SSB-210ENST00000474273 NOS1P29475 1434 aa1.28□□□□□ -2.2
SSB-210ENST00000474273 ERCC6Q03468 1493 aa1.28□□□□□ -2.2
SSB-210ENST00000474273 PLB1Q6P1J6 1458 aa1.28□□□□□ -2.2
SSB-210ENST00000474273 SHANK3Q9BYB0 1731 aa1.28□□□□□ -2.2
SSB-210ENST00000474273 SMARCA4P51532 1647 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 CCDC88BA6NC98 1476 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 NPHP4O75161 1426 aaPredicted RBP1.27□□□□□ -2.21
SSB-210ENST00000474273 MAP3K5Q99683 1374 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 IGKV1D-37A0A075B6S9 117 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 A0A1B0GTI1 187 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 MYBPHLA2RUH7 354 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 GOLGA8IPA6NC78 632 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 RBFOX3A6NFN3 312 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 ZNF729A6NN14 1252 aaPredicted RBP1.27□□□□□ -2.21
SSB-210ENST00000474273 C9J4A7 227 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 GOLGA8KD6RF30 607 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 C8orf87E5RJ46 101 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 FTCDNL1E5RQL4 147 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 GOLGA8MH3BSY2 632 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 SLC31A1O15431 190 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 SYNGR1O43759 233 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 CRTAPO75718 401 aaPredicted RBP1.27□□□□□ -2.21
SSB-210ENST00000474273 OR2A4O95047 310 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 RLN2P04090 185 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 PRB1P04280 392 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 GIMD1P0DJR0 217 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 IMPA1P29218 277 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 GRPRP30550 384 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 ERFP50548 548 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 PSMD7P51665 324 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 STC1P52823 247 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 RAB38P57729 211 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 RHOAP61586 193 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 BAXQ07812 192 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 FLOT2Q14254 428 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 CEACAM21Q3KPI0 293 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 MRPL2Q5T653 305 aaKnown RBP1.27□□□□□ -2.21
SSB-210ENST00000474273 SYT6Q5T7P8 510 aaPredicted RBP1.27□□□□□ -2.21
SSB-210ENST00000474273 ZNF773Q6PK81 442 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 DCXRQ7Z4W1 244 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 MRPL52Q86TS9 123 aaKnown RBP1.27□□□□□ -2.21
SSB-210ENST00000474273 LRRC34Q8IZ02 419 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 Q8NAQ8 132 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 LFNGQ8NES3 379 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 OR8G5Q8NG78 346 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 OR5H2Q8NGV7 314 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 CMTM5Q96DZ9 223 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 QKIQ96PU8 341 aaKnown RBP eCLIP1.27□□□□□ -2.211e-6■■□□□ 13.1
SSB-210ENST00000474273 OR2A7Q96R45 310 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 VAT1Q99536 393 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 GPR22Q99680 433 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 PAIP2Q9BPZ3 127 aaKnown RBP1.27□□□□□ -2.21
SSB-210ENST00000474273 TSSK6Q9BXA6 273 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 MRPL20Q9BYC9 149 aaKnown RBP1.27□□□□□ -2.21
SSB-210ENST00000474273 NSRP1Q9H0G5 558 aaKnown RBP1.27□□□□□ -2.21
SSB-210ENST00000474273 C6orf50Q9HD87 102 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 INSIG2Q9Y5U4 225 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 USH1CQ9Y6N9 552 aa1.27□□□□□ -2.21
SSB-210ENST00000474273 YLPM1P49750 1951 aaKnown RBP1.27□□□□□ -2.21
SSB-210ENST00000474273 SMARCA2P51531 1590 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 VWDEQ8N2E2 1590 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 BAZ1AQ9NRL2 1556 aaPredicted RBP1.26□□□□□ -2.21
SSB-210ENST00000474273 ZFYVE9O95405 1425 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 TINCRA0A1B0GVN0 87 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 F5H5T6 163 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 GPR171O14626 319 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 TRAPPC3O43617 180 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 ZNF73O43830 326 aaPredicted RBP1.26□□□□□ -2.21
SSB-210ENST00000474273 AHSA1O95433 338 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 RAB36O95755 333 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 EPPINO95925 133 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 CXorf1O96002 111 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 IGHMP01871 453 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 SERPINA6P08185 405 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 PET100P0DJ07 73 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 CNTFRP26992 372 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 SLC18A1P54219 525 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 DEFB103AP81534 67 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 MRPS15P82914 257 aaKnown RBP1.26□□□□□ -2.21
SSB-210ENST00000474273 ENDOGQ14249 297 aaKnown RBP1.26□□□□□ -2.21
SSB-210ENST00000474273 TRIP13Q15645 432 aaPredicted RBP1.26□□□□□ -2.21
SSB-210ENST00000474273 LRRC26Q2I0M4 334 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 TBC1D28Q2M2D7 210 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 ZNF181Q2M3W8 571 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 TMEM249Q2WGJ8 235 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 CLEC12AQ5QGZ9 265 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 HBMQ6B0K9 141 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 FAM45BPQ6NSW5 357 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 FAM173BQ6P4H8 233 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 SSX7Q7RTT5 188 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 LINC00596Q86U02 117 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 ZIC4Q8N9L1 334 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 OR4K17Q8NGC6 315 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 OR5L1Q8NGL2 311 aa1.26□□□□□ -2.21
SSB-210ENST00000474273 OR5AK3PQ8NH89 298 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms