RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 FCGR3AP08637 254 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 ZNF728P0DKX0 622 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 TNFSF8P32971 234 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 LOXL3P58215 753 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 GUCA2AQ02747 115 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 MADCAM1Q13477 382 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 HERPUD1Q15011 391 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 HMGN3Q15651 99 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 CNIH2Q6PI25 160 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 Q71RC1 249 aaPredicted RBP8.47□□□□□ -1.05
CASC3-204ENST00000474190 CCDC190Q86UF4 302 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 GLCCI1Q86VQ1 547 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 PRIMA1Q86XR5 153 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 FAM185AQ8N0U4 392 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 OR6Q1Q8NGQ2 317 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 MCFD2Q8NI22 146 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 UBALD1Q8TB05 177 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 CCDC107Q8WV48 283 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 NUDCD2Q8WVJ2 157 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 AP3S1Q92572 193 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 UPRTQ96BW1 309 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 Q9N2K0 584 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 TAS2R3Q9NYW6 316 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 ZNF230Q9UIE0 474 aaPredicted RBP8.47□□□□□ -1.05
CASC3-204ENST00000474190 UBE2J1Q9Y385 318 aaPredicted RBP8.47□□□□□ -1.05
CASC3-204ENST00000474190 KPTNQ9Y664 436 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 COL6A5A8TX70 2615 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 NBEAL1Q6ZS30 2694 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 hADV38S2A0JD32 116 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 SERPINE3A8MV23 424 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 F2RL2O00254 374 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 NOL3O60936 208 aaKnown RBP8.46□□□□□ -1.06
CASC3-204ENST00000474190 GSTP1P09211 210 aaKnown RBP8.46□□□□□ -1.06
CASC3-204ENST00000474190 IGHV1-8P0DP01 117 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 IGHV4-38-2P0DP08 117 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 OMGP23515 440 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 GATA3P23771 443 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 PRTN3P24158 256 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 SOX6P35712 828 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 RANBP1P43487 201 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 RBM39Q14498 530 aaKnown RBP8.46□□□□□ -1.06
CASC3-204ENST00000474190 PRAMEF5Q5TYX0 476 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 DCAF12L2Q5VW00 463 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 CLEC9AQ6UXN8 241 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 Q6ZS49 121 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 GVQW1Q8N7I0 195 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 OR1L1Q8NH94 360 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 PPP1R35Q8TAP8 253 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 MAFIPQ8WZ33 124 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 SNAPC3Q92966 411 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 KIRREL1Q96J84 757 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 MMP27Q9H306 513 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 TMEM160Q9NX00 188 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 CALYQ9NYX4 217 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 ADAM30Q9UKF2 790 aa8.46□□□□□ -1.06
CASC3-204ENST00000474190 A0A087X0M5 115 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 A0A0G2JMP0 313 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 CENPVL3A0A0U1RRI6 287 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 A0A0X1KG70 313 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 A0A1B0GX30 115 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 J3QLI3 93 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 ORC5O43913 435 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 HBZP02008 142 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 RBP4P02753 201 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 ETV6P41212 452 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 GLP1RP43220 463 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 KLRD1Q13241 179 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 ZNF79Q15937 498 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 PNLIPRP3Q17RR3 467 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 FAHD2BQ6P2I3 314 aaPredicted RBP8.45□□□□□ -1.06
CASC3-204ENST00000474190 MZT2AQ6P582 158 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 HEPN1Q6WQI6 88 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 IL17RELQ6ZVW7 336 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 VMO1Q7Z5L0 202 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 LDLRAD3Q86YD5 345 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 MFSD4AQ8N468 514 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 PNKDQ8N490 385 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 OR4M2Q8NGB6 313 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 RFESDQ8TAC1 157 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 GPX8Q8TED1 209 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 S100A16Q96FQ6 103 aaKnown RBP8.45□□□□□ -1.06
CASC3-204ENST00000474190 FAHD2AQ96GK7 314 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 ZNF714Q96N38 554 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 SDHCQ99643 169 aaPredicted RBP8.45□□□□□ -1.06
CASC3-204ENST00000474190 CMSS1Q9BQ75 279 aaKnown RBP8.45□□□□□ -1.06
CASC3-204ENST00000474190 OCSTAMPQ9BR26 566 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 C6orf62Q9GZU0 229 aaPredicted RBP8.45□□□□□ -1.06
CASC3-204ENST00000474190 PARP12Q9H0J9 701 aaKnown RBP8.45□□□□□ -1.06
CASC3-204ENST00000474190 C7orf69Q9H7B7 122 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 TAF9BQ9HBM6 251 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 C12orf4Q9NQ89 552 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 SIRT7Q9NRC8 400 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 OR6C3Q9NZP0 311 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 ZNRD1Q9P1U0 126 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 ONECUT1Q9UBC0 465 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 AUP1Q9Y679 476 aa8.45□□□□□ -1.06
CASC3-204ENST00000474190 TRGV10A0A0A0MS01 117 aa8.44□□□□□ -1.06
CASC3-204ENST00000474190 A0A1W2PQ09 198 aa8.44□□□□□ -1.06
CASC3-204ENST00000474190 ZNF729A6NN14 1252 aaPredicted RBP8.44□□□□□ -1.06
CASC3-204ENST00000474190 POM121CA8CG34 1229 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms