RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 TSTA3Q13630 321 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 PDGFRLQ15198 375 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 LTC4SQ16873 150 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 UFSP1Q6NVU6 142 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 C12orf54Q6X4T0 127 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF595Q8IYB9 648 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 RFLNBQ8N5W9 214 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 SIGLECL1Q8N7X8 197 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 MARCH1Q8TCQ1 289 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 SKA2Q8WVK7 121 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 WBP2Q969T9 261 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 GNPNAT1Q96EK6 184 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 LINC00470Q9BZP3 86 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 GTSF1LQ9H1H1 148 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 CENPMQ9NSP4 180 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 JPT1Q9UK76 154 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 MRPS28Q9Y2Q9 187 aaKnown RBP4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 SCN1AP35498 2009 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 DUXBA0A1W2PPF3 345 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 GAGE10A6NGK3 116 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 OR2T8A6NH00 312 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 M0R1X1 148 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 CDC42EP2O14613 210 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 MPZL1O95297 269 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 ETHE1O95571 254 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 CD55P08174 381 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 BCL2P10415 239 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 OMGP23515 440 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 LOXL3P58215 753 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 FXYD6P3P58550 94 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 GNMTQ14749 295 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 CD300EQ496F6 205 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 VAX1Q5SQQ9 334 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 FBXL22Q6P050 247 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 PLXDC2Q6UX71 529 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 PAQR9Q6ZVX9 377 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 BHLHA9Q7RTU4 235 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 CSNK1A1LQ8N752 337 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 OR4K13Q8NH42 304 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 MED10Q9BTT4 135 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 SAMD10Q9BYL1 202 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 PATZ1Q9HBE1 687 aaKnown RBP4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 SLC7A10Q9NS82 523 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 HS3ST3A1Q9Y663 406 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 PTPRSQ13332 1948 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 TRAV8-7A0A075B6U6 113 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 NPIPB15A6NHN6 443 aaPredicted RBP4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 CPSF4LA6NMK7 179 aaKnown RBP4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 C17orf112F2Z3M2 114 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 FOXS1O43638 330 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 GPR75O95800 540 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 MMP9P14780 707 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 NPPBP16860 134 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 CD22P20273 847 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 HRH1P35367 487 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 SGSHP51688 502 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 SUPT4H1P63272 117 aaKnown RBP4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 HSPB3Q12988 150 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 IL13RA2Q14627 380 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 ADIRFQ15847 76 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 COX19Q49B96 90 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 C9orf57Q5W0N0 161 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 MRPL54Q6P161 138 aaKnown RBP4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 TRAPPC6BQ86SZ2 158 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 SLC25A40Q8TBP6 338 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 ACER1Q8TDN7 264 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 ZG16BQ96DA0 208 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 RTBDNQ9BSG5 229 aaPredicted RBP4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 BANF2Q9H503 90 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 C5orf66Q9H5L9 145 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 VDAC3Q9Y277 283 aa4.4□□□□□ -1.7
TMEM39A-206ENST00000473684 A0A0G2JMM0 328 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 A0A1W2PPB8 328 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 TMEM212A6NML5 194 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 KIR3DP1A8MWS1 328 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF732B4DXR9 585 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 J3QR89 54 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 CLDN5O00501 218 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 IFNA1P01562 189 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 IFNA5P01569 189 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 KLKB1P03952 638 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 MPC1LP0DKB6 136 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 AADACP22760 399 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 DUSP1P28562 367 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 SOX2P48431 317 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 CLDN6P56747 220 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 TAS2R50P59544 299 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 NANOS3P60323 173 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 KRTDAPP60985 99 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 YPEL3P61236 119 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 Q0VG73 95 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 DCST2Q5T1A1 773 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF684Q5T5D7 378 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 Q8NA96 180 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 GLYATL1Q969I3 302 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 DERL1Q9BUN8 251 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 PHF7Q9BWX1 381 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 PRSS16Q9NQE7 514 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 TAAR2Q9P1P5 351 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms