RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CNTFRP26992 372 aa9.75□□□□□ -0.85
TRAF4-209ENST00000473421 C21orf33P30042 268 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-209ENST00000473421 ZNF134P52741 427 aa9.75□□□□□ -0.85
TRAF4-209ENST00000473421 GNGT1P63211 74 aa9.75□□□□□ -0.85
TRAF4-209ENST00000473421 KISS1Q15726 138 aa9.75□□□□□ -0.85
TRAF4-209ENST00000473421 TMEM244Q5VVB8 128 aa9.75□□□□□ -0.85
TRAF4-209ENST00000473421 C5orf24Q7Z6I8 188 aa9.75□□□□□ -0.85
TRAF4-209ENST00000473421 Q8N1Y9 231 aa9.75□□□□□ -0.85
TRAF4-209ENST00000473421 OR13C3Q8NGS6 347 aa9.75□□□□□ -0.85
TRAF4-209ENST00000473421 NRBF2Q96F24 287 aa9.75□□□□□ -0.85
TRAF4-209ENST00000473421 NCOR1P1Q9H4R4 102 aa9.75□□□□□ -0.85
TRAF4-209ENST00000473421 KRT84Q9NSB2 600 aa9.75□□□□□ -0.85
TRAF4-209ENST00000473421 SAP30O75446 220 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 MOSP00540 346 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 SNRPBP14678 240 aaKnown RBP9.74□□□□□ -0.85
TRAF4-209ENST00000473421 VDAC1P21796 283 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 MYF6P23409 242 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 SOX6P35712 828 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 ZNF616Q08AN1 781 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 DOC2BQ14184 412 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 SRSF7Q16629 238 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRAF4-209ENST00000473421 ZNF691Q5VV52 312 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 KDM4DQ6B0I6 523 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 ELP2Q6IA86 826 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 FDX2Q6P4F2 183 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 SUMF2Q8NBJ7 301 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 OR51A2Q8NGJ7 313 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 CCDC107Q8WV48 283 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 DNAJC9Q8WXX5 260 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 UBE2E2Q96LR5 201 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 RASL11BQ9BPW5 248 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 BARHL1Q9BZE3 327 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 ZCCHC4Q9H5U6 513 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 TPSG1Q9NRR2 321 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 AASSQ9UDR5 926 aa9.74□□□□□ -0.85
TRAF4-209ENST00000473421 E9PI62 339 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 J3QRE1 110 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 GABRPO00591 440 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 OVOL1O14753 267 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 ATP6V0E1O15342 81 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 SOX15O60248 233 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 IGLV1-40P01703 118 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 OR8U8P0C7N1 319 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 OCM2P0CE71 109 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 OCMP0CE72 109 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-209ENST00000473421 CD1BP29016 333 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 MTNR1BP49286 362 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 INSL3P51460 131 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 RUNX1Q01196 453 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 FLOT2Q14254 428 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 FAM27D1Q5T7N8 215 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 ZNF429Q86V71 674 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 ZNF439Q8NDP4 499 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 ARPC1AQ92747 370 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 PELI1Q96FA3 418 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 CIB1Q99828 191 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 DPCDQ9BVM2 203 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-209ENST00000473421 GON7Q9BXV9 100 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 ZMAT4Q9H898 229 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 RHOFQ9HBH0 211 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 KIAA1456Q9P272 454 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 ZNF107Q9UII5 783 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-209ENST00000473421 FBXO7Q9Y3I1 522 aa9.73□□□□□ -0.85
TRAF4-209ENST00000473421 SIRT4Q9Y6E7 314 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-209ENST00000473421 IGHV4OR15-8A0A075B7B6 117 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 A0A087WW49 117 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 FAM90A10PA6NDY2 464 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 SDCBPO00560 298 aaPredicted RBP9.72□□□□□ -0.85
TRAF4-209ENST00000473421 CDRT1O95170 752 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 IGHV4-30-4P0DP06 118 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 CALB2P22676 271 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 ATP6V1E1P36543 226 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 RAB9AP51151 201 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 PAX5Q02548 391 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 CT45A1Q5HYN5 189 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 SLC16A12Q6ZSM3 486 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 LINC00311Q8N616 119 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 OR10A7Q8NGE5 316 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 CT45A3Q8NHU0 189 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 ARL11Q969Q4 196 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 PRRG3Q9BZD7 231 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 ISG20L2Q9H9L3 353 aaKnown RBP9.72□□□□□ -0.85
TRAF4-209ENST00000473421 C19orf73Q9NVV2 129 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 GFOD1Q9NXC2 390 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 POMPQ9Y244 141 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 VSIG4Q9Y279 399 aa9.72□□□□□ -0.85
TRAF4-209ENST00000473421 IGHV7-81A0A0B4J1V7 117 aa9.71□□□□□ -0.86
TRAF4-209ENST00000473421 A0A1W2PP11 408 aa9.71□□□□□ -0.86
TRAF4-209ENST00000473421 J3QLW9 94 aa9.71□□□□□ -0.86
TRAF4-209ENST00000473421 SLC16A6O15403 523 aa9.71□□□□□ -0.86
TRAF4-209ENST00000473421 SULT1B1O43704 296 aa9.71□□□□□ -0.86
TRAF4-209ENST00000473421 FAM107AO95990 144 aa9.71□□□□□ -0.86
TRAF4-209ENST00000473421 DBTP11182 482 aaKnown RBP9.71□□□□□ -0.86
TRAF4-209ENST00000473421 ZNF19P17023 458 aa9.71□□□□□ -0.86
TRAF4-209ENST00000473421 BLVRBP30043 206 aaPredicted RBP9.71□□□□□ -0.86
TRAF4-209ENST00000473421 NDPQ00604 133 aa9.71□□□□□ -0.86
TRAF4-209ENST00000473421 ALKBH1Q13686 389 aaKnown RBP9.71□□□□□ -0.86
TRAF4-209ENST00000473421 ACSM6Q6P461 480 aa9.71□□□□□ -0.86
TRAF4-209ENST00000473421 FAM220AQ7Z4H9 259 aa9.71□□□□□ -0.86
TRAF4-209ENST00000473421 AMIGO2Q86SJ2 522 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms